Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed DNA polymerase activity

Term: GO:0003887  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene66976 SustainPine v3.0 245
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9MYH6_POPTR 9.0e-29
FL-Next: sp=DNA polymerase; subsp. trichocarpa). 0.0
Sma3: DNA polymerase 2.672e-35
Internal
sp_v3.0_unigene67846 SustainPine v3.0 214
AutoFact: DNA polymerase delta subunit 2 [Arabidopsis thaliana] sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana] gb|AAP49515.1| At2g42120 [Arabidopsis thaliana 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene68941 SustainPine v3.0 211
AutoFact: DNA polymerase n=4 Tax=Arabidopsis RepID=Q9ZVC8_ARATH 6.0e-11
FL-Next: sp=DNA polymerase; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: DNA polymerase 1.579e-23
Internal
sp_v3.0_unigene69279 SustainPine v3.0 307
AutoFact: Similarity to DNA polymerase III n=1 Tax=Arabidopsis thaliana RepID=Q9FK71_ARATH 2.0e-24
FL-Next: tr=Similarity to DNA polymerase III; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene69442 SustainPine v3.0 204
AutoFact: DNA repair protein REV1 n=8 Tax=Arabidopsis RepID=A3EWL3_ARATH 2.0e-17
FL-Next: Isoform 6 of DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 0.0
Sma3: Deoxycytidyl transferase 2.796e-09
Putative C-terminus
sp_v3.0_unigene70101 SustainPine v3.0 333
AutoFact: Replication factor C / DNA polymerase III gamma-tau subunit, putative n=1 Tax=Ricinus communis RepID=B9S048_RICCO 2.0e-31
FL-Next: tr=Replication factor C / DNA polymerase III gamma-tau subunit, putative; Ricinus communis (Castor bean). 0.0
Sma3: Replication factor C / DNA polymerase III gamma-tau subunit, putative 5.416e-14
Internal
sp_v3.0_unigene70490 SustainPine v3.0 434
AutoFact: DNA polymerase IV n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDT5_ACIJO 0.0
FL-Next: sp=DNA repair protein REV1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene70507 SustainPine v3.0 342
AutoFact: Calcium ATPase n=3 Tax=Papilionoideae RepID=D3YBB1_TRIRP 6.0e-36
FL-Next: sp=Calcium-transporting ATPase 1, plasma membrane-type; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Autoinhibited calcium ATPase 1.61e-21
Internal
sp_v3.0_unigene72302 SustainPine v3.0 190
AutoFact: Replication factor C / DNA polymerase III gamma-tau subunit, putative n=1 Tax=Ricinus communis RepID=B9S8E5_RICCO 8.0e-11
FL-Next: tr=Replication factor C / DNA polymerase III gamma-tau subunit, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene72728 SustainPine v3.0 146
AutoFact: calcium-transporting ATPase 8 [Arabidopsis thaliana] ref|NP_200521.3| calcium-transporting ATPase 8 [Arabidopsis thaliana] sp|Q9LF79.1|ACA8_ARATH RecName: Full=Calcium-transporting ATPase 8, plasma membrane-type; AltName: Full=Ca(2+)-ATPase isoform 8 emb| 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 3.492e-29
Internal
sp_v3.0_unigene72806 SustainPine v3.0 224
AutoFact: DNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=D7U4B5_VITVI 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA polymerase 3.515e-23
C-terminus
sp_v3.0_unigene73068 SustainPine v3.0 127
AutoFact: DNA polymerase epsilon subunit B -like protein [Arabidopsis thaliana] 1.0e-05
FL-Next: tr=Putative uncharacterized protein Sb07g022680; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene73904 SustainPine v3.0 454
AutoFact: Autoinhibited calcium ATPase n=1 Tax=Populus trichocarpa RepID=B9HAW9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 2.569e-40
N-terminus
sp_v3.0_unigene75919 SustainPine v3.0 368
AutoFact: DNA polymerase theta subunit n=2 Tax=Arabidopsis RepID=Q588V7_ARATH 1.0e-33
FL-Next: tr=DNA polymerase theta, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene76041 SustainPine v3.0 268
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene80276 SustainPine v3.0 153
AutoFact: DNA polymerase lambda [Oryza sativa Japonica Group] 1.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene80484 SustainPine v3.0 139
AutoFact: DNA polymerase lambda subunit [Arabidopsis thaliana] emb|CAC21394.1| DNA polymerase lambda [Arabidopsis thaliana] gb|ABE65612.1| DNA polymerase lambda [Arabidopsis thaliana] gb|ADM33939.1| DNA pol lambda [Arabidopsis thaliana] gb|AEE28588.1| DNA polymeras 3.0e-12
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Sma3: DNA polymerase lambda 2.116e-09
Internal
sp_v3.0_unigene81061 SustainPine v3.0 155
AutoFact: Replication factor C / DNA polymerase III gamma-tau subunit, putative n=1 Tax=Ricinus communis RepID=B9S048_RICCO 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene94558 SustainPine v3.0 622
AutoFact: DNA polymerase delta subunit 2 [Arabidopsis thaliana] sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana] gb|AAP49515.1| At2g42120 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA polymerase delta small subunit 8.437e-14
C-terminus
sp_v3.0_unigene95195 SustainPine v3.0 886
AutoFact: Umuc-like DNA repair protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7T2_MICSR 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Chlorella variabilis (Green alga). 0.0
Sma3: Umuc-like DNA repair protein 4.386e-06
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain