Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed DNA polymerase.

Term: EC:2.7.7.7  Help

Source: EC from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene147 SustainPine v3.0 2292
AutoFact: DNA polymerase n=2 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MMP0_ARALL 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 3.052e-14
C-terminus
sp_v3.0_unigene1544 SustainPine v3.0 3990
AutoFact: DNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=D7U4B5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1887 SustainPine v3.0 2829
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: DNA polymerase 1.099e-23
C-terminus
sp_v3.0_unigene2484 SustainPine v3.0 1298
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HHA9_POPTR 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 5.732e-20
Internal
sp_v3.0_unigene3042 SustainPine v3.0 5664
AutoFact: Replication factor C / DNA polymerase III gamma-tau subunit, putative n=1 Tax=Ricinus communis RepID=B9S048_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Replication factor C / DNA polymerase III gamma-tau subunit, putative 3.027e-14
Complete
sp_v3.0_unigene9791 SustainPine v3.0 1034
AutoFact: putative ethylene-responsive RNA helicase [Oryza sativa Japonica Group] 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 3.81e-08
Putative C-terminus
sp_v3.0_unigene13906 SustainPine v3.0 851
AutoFact: DNA polymerase delta subunit 2 [Arabidopsis thaliana] sp|O48520.2|DPOD2_ARATH RecName: Full=DNA polymerase delta small subunit gb|AAM97084.1| putative DNA polymerase delta small subunit [Arabidopsis thaliana] gb|AAP49515.1| At2g42120 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA polymerase delta small subunit 3.441e-09
N-terminus
sp_v3.0_unigene14001 SustainPine v3.0 1796
AutoFact: replication factor C 40kDa subunit [Oryza sativa Japonica Group] emb|CAH67033.1| OSIGBa0139P06.6 [Oryza sativa Indica Group] gb|EEC77820.1| hypothetical protein OsI_17026 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene23861 SustainPine v3.0 567
AutoFact: putative DNA polymerase epsilon catalytic subunit protein isoform b [Oryza sativa Japonica Group] 0.0
FL-Next: sp=DNA polymerase; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Sma3: DNA polymerase 1.854e-29
C-terminus
sp_v3.0_unigene31308 SustainPine v3.0 706
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SVW3_VITVI 1.0e-20
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 2.179e-06
N-terminus
sp_v3.0_unigene44125 SustainPine v3.0 290
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SN27_VITVI 1.0e-34
FL-Next: sp=DNA polymerase; Vitis vinifera (Grape). 0.0
Sma3: DNA polymerase 8.296e-21
Internal
sp_v3.0_unigene46288 SustainPine v3.0 300
AutoFact: DNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8RS33_SELML 3.0e-40
FL-Next: sp=DNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: DNA polymerase 5.481e-29
Internal
sp_v3.0_unigene46478 SustainPine v3.0 251
AutoFact: AAA-type ATPase-like protein [Arabidopsis thaliana] gb|AAF82285.1|AF264023_1 STICHEL [Arabidopsis thaliana] gb|AAC18938.2| similar to prokaryotic DNA polymerase III gamma subunit [Arabidopsis thaliana] gb|AEC05585.1| AAA-type ATPase-like protein [Arabidop 1.0e-16
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Replication factor C / DNA polymerase III gamma-tau subunit, putative 7.309e-14
Internal
sp_v3.0_unigene46519 SustainPine v3.0 267
AutoFact: Putataive DNA polymerase delta small subunit [Oryza sativa Japonica Group] 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA polymerase delta small subunit 6.381e-14
Internal
sp_v3.0_unigene46884 SustainPine v3.0 117
AutoFact: DNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9SGD5_ARATH 1.0e-14
FL-Next: sp=DNA polymerase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA polymerase 4.748e-35
Internal
sp_v3.0_unigene48829 SustainPine v3.0 213
AutoFact: DNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SJG5_SELML 1.0e-18
FL-Next: sp=DNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: DNA polymerase 1.32e-23
Internal
sp_v3.0_unigene50055 SustainPine v3.0 401
AutoFact: DNA polymerase alpha catalytic subunit n=1 Tax=Arabidopsis thaliana RepID=F4K285_ARATH 1.0e-30
FL-Next: sp=DNA polymerase alpha catalytic subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA polymerase alpha catalytic subunit 2.258e-09
Internal
sp_v3.0_unigene53261 SustainPine v3.0 331
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SSU6_RICCO 0.0
FL-Next: sp=DNA polymerase; Ricinus communis (Castor bean). 0.0
Sma3: DNA polymerase 4.748e-35
Internal
sp_v3.0_unigene53283 SustainPine v3.0 218
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U238_VITVI 1.0e-16
FL-Next: sp=DNA polymerase; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: DNA polymerase 2.752e-09
N-terminus
sp_v3.0_unigene59919 SustainPine v3.0 338
AutoFact: DNA polymerase n=2 Tax=Andropogoneae RepID=C5XR76_SORBI 3.0e-24
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 3.944e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain