Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr11 scaffold_56, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1298 SustainPine v3.0 1427
AutoFact: [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene8966 SustainPine v3.0 305
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SM56_RICCO 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 5.737e-08
Internal
sp_v3.0_unigene20032 SustainPine v3.0 2415
AutoFact: Afadin/alpha-actinin-binding protein [Arabidopsis thaliana] gb|AAW81730.1| At5g57410 [Arabidopsis thaliana] gb|AAX49379.1| At5g57410 [Arabidopsis thaliana] dbj|BAH30633.1| hypothetical protein [Arabidopsis thaliana] gb|AED96898.1| Afadin/alpha-actinin-bin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene33276 SustainPine v3.0 452
AutoFact: xyloglucan endotransglycosylase/hydrolase precursor XTH-6 [Populus tremula] 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 4.016e-08
C-terminus
sp_v3.0_unigene52979 SustainPine v3.0 333
AutoFact: Protein kinase [Medicago truncatula] 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 6.338e-10
Internal
sp_v3.0_unigene69757 SustainPine v3.0 173
AutoFact: Unassigned protein
FL-Next: tr=Os02g0785000 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 6.757e-09
Internal
sp_v3.0_unigene76166 SustainPine v3.0 249
AutoFact: putative leucine rich repeat containing protein kinase [Oryza sativa Japonica Group] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 4.627e-11
Internal
sp_v3.0_unigene77737 SustainPine v3.0 274
AutoFact: LRRNT_2 domain containing protein 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 8.558e-08
Internal
sp_v3.0_unigene101442 SustainPine v3.0 306
AutoFact: transferase, transferring glycosyl groups 1.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 3.008e-08
Internal
sp_v3.0_unigene102220 SustainPine v3.0 840
AutoFact: Pkinase domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 1.8e-09
C-terminus
sp_v3.0_unigene122018 SustainPine v3.0 217
AutoFact: OSJNBa0021F22.13 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XP87_ORYSJ 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 4.982e-13
Internal
sp_v3.0_unigene143961 SustainPine v3.0 406
AutoFact: Xyloglucan:xyloglucosyl transferase, putative n=1 Tax=Ricinus communis RepID=B9SAD7_RICCO 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 4.904e-08
C-terminus
sp_v3.0_unigene146572 SustainPine v3.0 361
AutoFact: Glyco_hydro_16 domain containing protein 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 3.626e-06
Putative C-terminus
sp_v3.0_unigene189508 SustainPine v3.0 353
AutoFact: putative protein kinase Xa21 [Oryza sativa Japonica Group] 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 5.394e-08
Internal
sp_v3.0_unigene196537 SustainPine v3.0 304
AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 2.395e-11
N-terminus
sp_v3.0_unigene197632 SustainPine v3.0 282
AutoFact: transferase, transferring glycosyl groups 1.0e-22
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 5.737e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain