Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr12 scaffold_18, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1281 SustainPine v3.0 1998
AutoFact: Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana] gb|AAK43988.1|AF370173_1 unknown protein [Arabidopsis thaliana] dbj|BAD43192.1| unknown protein [Arabidopsis thaliana] dbj|BAD43746.1| unknown protein [Arabidopsis thaliana] dbj|BAD4 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene2285 SustainPine v3.0 2052
AutoFact: Lustrin A-like n=4 Tax=Oryza sativa RepID=Q69T67_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 8.951e-08
Complete
sp_v3.0_unigene3719 SustainPine v3.0 3866
AutoFact: pfam04841, Vps16_N, Vps16, N-terminal region 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene5301 SustainPine v3.0 3803
AutoFact: Golgi transport complex-related protein [Arabidopsis thaliana] gb|AAG52007.1|AC012563_17 putative golgi transport complex protein; 67058-70172 [Arabidopsis thaliana] gb|AEE34723.1| Golgi transport complex-related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 8.691e-08
Complete
sp_v3.0_unigene11422 SustainPine v3.0 1039
AutoFact: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 n=2 Tax=Arabidopsis RepID=SD25_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.082e-16
C-terminus
sp_v3.0_unigene14434 SustainPine v3.0 1315
AutoFact: lectin protein kinase-like protein [Arabidopsis thaliana] sp|Q9XID3.1|Y1343_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Flags: Precursor gb|AAD39605.1|AC007454_4 Contains similarity to gi|479356 protein kin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 2.38e-17
C-terminus
sp_v3.0_unigene16293 SustainPine v3.0 641
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SM56_RICCO 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 2.0e-10
Internal
sp_v3.0_unigene29194 SustainPine v3.0 342
AutoFact: OSJNBb0018A10.13 protein n=1 Tax=Oryza sativa RepID=Q7XMC2_ORYSA 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.876e-18
Internal
sp_v3.0_unigene34479 SustainPine v3.0 2864
AutoFact: Lustrin A-like n=4 Tax=Oryza sativa RepID=Q69T67_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 7.116e-09
Complete
sp_v3.0_unigene46047 SustainPine v3.0 2087
AutoFact: pfam01453, B_lectin, D-mannose binding lectin 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 2.714e-09
Complete
sp_v3.0_unigene48600 SustainPine v3.0 210
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.561e-15
Internal
sp_v3.0_unigene52949 SustainPine v3.0 355
AutoFact: protein kinase-like protein [Arabidopsis thaliana] sp|Q9SAH3.1|Y1887_ARATH RecName: Full=Putative receptor-like protein kinase At1g80870 gb|AAF14675.1|AC011713_23 Contains similarity to gb|U82481 KI domain interacting kinase 1 from Zea mays and contains P 1.0e-23
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.183e-09
Internal
sp_v3.0_unigene57938 SustainPine v3.0 329
AutoFact: S-locus-like receptor protein kinase [Prunus persica] 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.288e-07
Internal
sp_v3.0_unigene63860 SustainPine v3.0 284
AutoFact: S-receptor kinase, putative n=1 Tax=Ricinus communis RepID=B9RJ59_RICCO 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.16e-14
Internal
sp_v3.0_unigene70511 SustainPine v3.0 403
AutoFact: Receptor protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RJJ2_RICCO 3.0e-21
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.651e-06
Internal
sp_v3.0_unigene70556 SustainPine v3.0 378
AutoFact: protein kinase [Oryza sativa] 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.703e-12
Internal
sp_v3.0_unigene80749 SustainPine v3.0 137
AutoFact: S-domain class receptor-like kinase3 [Zea mays] emb|CAA09029.1| S-domain receptor-like protein kinase [Zea mays] 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 2.836e-10
Internal
sp_v3.0_unigene96633 SustainPine v3.0 475
AutoFact: uncharacterized protein [Arabidopsis thaliana] dbj|BAB09804.1| unnamed protein product [Arabidopsis thaliana] dbj|BAF01304.1| hypothetical protein [Arabidopsis thaliana] gb|AED91052.1| uncharacterized protein [Arabidopsis thaliana] 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 3.798e-06
C-terminus
sp_v3.0_unigene119924 SustainPine v3.0 201
AutoFact: OSJNBb0018A10.13 protein n=1 Tax=Oryza sativa RepID=Q7XMC2_ORYSA 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 3.259e-19
Internal
sp_v3.0_unigene120240 SustainPine v3.0 250
AutoFact: Protein kinase [Medicago truncatula] 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 5.08e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain