Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: DNA topoisomerase (ATP-hydrolyzing) activity

Term: GO:0003918  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene93791 SustainPine v3.0 1497
AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE 0.0
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 7.399e-09
N-terminus
sp_v3.0_unigene99099 SustainPine v3.0 217
AutoFact: DNA topoisomerase 2 n=3 Tax=Selaginella moellendorffii RepID=D8RNR7_SELML 3.0e-28
FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
Sma3: DNA topoisomerase 2 0.0
Internal
sp_v3.0_unigene99311 SustainPine v3.0 259
AutoFact: DNA topoisomerase 2 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RWX5_PHYPA 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA topoisomerase 2 5.79e-26
N-terminus
sp_v3.0_unigene138108 SustainPine v3.0 210
AutoFact: DNA topoisomerase 2 n=2 Tax=Malus x domestica RepID=Q2L363_MALDO 1.0e-10
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 2.973e-35
Internal
sp_v3.0_unigene141014 SustainPine v3.0 871
AutoFact: RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I gb|AAB41401.1| topoisomerase I [Daucus carota] 2.0e-39
FL-Next: sp=DNA topoisomerase 1; Daucus carota (Carrot). 0.0
Sma3: Topoisomerase I 2.543e-25
Internal
sp_v3.0_unigene142581 SustainPine v3.0 462
AutoFact: DNA topoisomerase II, putative n=1 Tax=Ricinus communis RepID=B9RVN3_RICCO 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene149164 SustainPine v3.0 111
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 3.0e-08
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene151812 SustainPine v3.0 543
AutoFact: Topoisomerase IV subunit A n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHZ0_9GAMM 0.0
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 7.399e-09
Internal
sp_v3.0_unigene152974 SustainPine v3.0 366
AutoFact: DNA gyrase subunit B n=82 Tax=Bacteroidetes RepID=A6GX10_FLAPJ 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA gyrase subunit B, chloroplastic/mitochondrial 1.351e-08
Internal
sp_v3.0_unigene157868 SustainPine v3.0 345
AutoFact: Similar to uniprot|P04786 Saccharomyces cerevisiae YOL006c TOP1 DNA topoisomerase I n=1 Tax=Candida glabrata CBS 138 RepID=Q6FNH4_CANGA 2.0e-18
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene161857 SustainPine v3.0 155
AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE 1.0e-07
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Internal
sp_v3.0_unigene165174 SustainPine v3.0 197
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 1.0e-23
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 0.0
Internal
sp_v3.0_unigene168175 SustainPine v3.0 274
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 1.0e-33
FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
Sma3: DNA topoisomerase 2 5.04047e-42
Internal
sp_v3.0_unigene168348 SustainPine v3.0 205
AutoFact: DNA topoisomerase 2 n=2 Tax=Oryza sativa Japonica Group RepID=Q6Z8D9_ORYSJ 5.0e-29
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 0.0
Internal
sp_v3.0_unigene183563 SustainPine v3.0 816
AutoFact: DNA topoisomerase 2 n=2 Tax=Malus x domestica RepID=Q2L363_MALDO 3.0e-08
FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
Sma3: DNA topoisomerase 2 5.327e-32
Internal
sp_v3.0_unigene187880 SustainPine v3.0 585
AutoFact: Unassigned protein 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene208781 SustainPine v3.0 252
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA topoisomerase 2 5.79e-26
N-terminus
sp_v3.0_unigene208815 SustainPine v3.0 329
AutoFact: DNA gyrase subunit A, chloroplast/mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9SK06_RICCO 7.0e-28
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 7.399e-09
Internal
sp_v3.0_unigene210200 SustainPine v3.0 431
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain