Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topoisomerase (ATP-hydrolyzing).

Term: EC:5.99.1.3  Help

Source: EC from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1243 SustainPine v3.0 3732
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene3273 SustainPine v3.0 2627
• AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 5.669e-09
Complete
sp_v3.0_unigene5766 SustainPine v3.0 2502
• AutoFact: DNA topoisomerase 2 n=1 Tax=Micromonas sp. RCC299 RepID=C1E5N4_MICSR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA topoisomerase 2 0.0
Putative C-terminus
sp_v3.0_unigene23476 SustainPine v3.0 1318
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA topoisomerase 2 0.0
N-terminus
sp_v3.0_unigene45816 SustainPine v3.0 443
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
• FL-Next: sp=Probable DNA gyrase subunit A, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 7.399e-09
Internal
sp_v3.0_unigene46711 SustainPine v3.0 339
• AutoFact: DNA topoisomerase 2 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RWX5_PHYPA 5.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA topoisomerase 2 9.818e-26
N-terminus
sp_v3.0_unigene52792 SustainPine v3.0 181
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 3.0e-14
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 5.206e-20
Internal
sp_v3.0_unigene56621 SustainPine v3.0 176
• AutoFact: DNA topoisomerase 2 n=1 Tax=Nicotiana tabacum RepID=Q8GSC4_TOBAC 1.0e-18
• FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
• Sma3: DNA topoisomerase 2 3.095e-35
Internal
sp_v3.0_unigene57192 SustainPine v3.0 272
• AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE 2.0e-16
• FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
• Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 3.06e-09
Internal
sp_v3.0_unigene58359 SustainPine v3.0 232
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 4.0e-12
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 1.459e-38
Internal
sp_v3.0_unigene58528 SustainPine v3.0 221
• AutoFact: DNA topoisomerase 2 n=1 Tax=Nicotiana tabacum RepID=Q8GSC4_TOBAC 4.0e-10
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 4.921e-32
Internal
sp_v3.0_unigene76805 SustainPine v3.0 102
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 2.0e-09
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 1.565e-22
Internal
sp_v3.0_unigene93791 SustainPine v3.0 1497
• AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE 0.0
• FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
• Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 7.399e-09
N-terminus
sp_v3.0_unigene99099 SustainPine v3.0 217
• AutoFact: DNA topoisomerase 2 n=3 Tax=Selaginella moellendorffii RepID=D8RNR7_SELML 3.0e-28
• FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
• Sma3: DNA topoisomerase 2 0.0
Internal
sp_v3.0_unigene99311 SustainPine v3.0 259
• AutoFact: DNA topoisomerase 2 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RWX5_PHYPA 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA topoisomerase 2 5.79e-26
N-terminus
sp_v3.0_unigene138108 SustainPine v3.0 210
• AutoFact: DNA topoisomerase 2 n=2 Tax=Malus x domestica RepID=Q2L363_MALDO 1.0e-10
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 2.973e-35
Internal
sp_v3.0_unigene151812 SustainPine v3.0 543
• AutoFact: Topoisomerase IV subunit A n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHZ0_9GAMM 0.0
• FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
• Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 7.399e-09
Internal
sp_v3.0_unigene152974 SustainPine v3.0 366
• AutoFact: DNA gyrase subunit B n=82 Tax=Bacteroidetes RepID=A6GX10_FLAPJ 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA gyrase subunit B, chloroplastic/mitochondrial 1.351e-08
Internal
sp_v3.0_unigene161857 SustainPine v3.0 155
• AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE 1.0e-07
• FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Internal
sp_v3.0_unigene165174 SustainPine v3.0 197
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 1.0e-23
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain