Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Elongation factor 1-alpha

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene77038 SustainPine v3.0 140
AutoFact: Elongation factor 1-alpha-like protein (Fragment) n=6 Tax=Spermatophyta RepID=D3G8A2_LOLPR 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene77187 SustainPine v3.0 250
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative N-terminus
sp_v3.0_unigene78369 SustainPine v3.0 223
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative N-terminus
sp_v3.0_unigene78801 SustainPine v3.0 85
AutoFact: elongation factor alpha7 [Zea mays] gb|AAF42981.1| elongation factor 1 alpha [Zea mays] 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 4.983e-12
Putative C-terminus
sp_v3.0_unigene79033 SustainPine v3.0 366
AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Rimicaris exoculata RepID=D7F1R6_RIMEX 2.0e-26
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 3.186e-26
Internal
sp_v3.0_unigene79081 SustainPine v3.0 194
AutoFact: translation elongation factor 1 alpha [Plantago major] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Misassembled
sp_v3.0_unigene79239 SustainPine v3.0 284
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-26
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 5.299e-36
Misassembled
sp_v3.0_unigene79934 SustainPine v3.0 250
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 2.0e-29
FL-Next: sp=Elongation factor 1-alpha; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene79939 SustainPine v3.0 121
AutoFact: Elongation factor 1-alpha n=1 Tax=Seculamonas ecuadoriensis RepID=C1K9U6_9EUKA 3.0e-09
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 7.44e-17
Internal
sp_v3.0_unigene80177 SustainPine v3.0 194
AutoFact: translation elongation factor-1 alpha [Picea abies] 3.0e-12
FL-Next: sp=Elongation factor 1-alpha; Euglena gracilis. 0.0
Sma3: Elongation factor 1-alpha 1.313e-33
Internal
sp_v3.0_unigene80231 SustainPine v3.0 208
AutoFact: Translation elongation factor 1-alpha (Fragment) n=3 Tax=Hypocreales RepID=A4U9K0_9HYPO 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene81351 SustainPine v3.0 194
AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Spirogyra sp. FWAC125 RepID=A6MWT3_9VIRI 7.0e-23
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 3.39e-31
Internal
sp_v3.0_unigene81451 SustainPine v3.0 186
AutoFact: Elongation factor-1 alpha (Fragment) n=11 Tax=Triaenonychidae RepID=D7RGG5_9ARAC 5.0e-27
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene81513 SustainPine v3.0 148
AutoFact: Elongation factor 1-alpha (Fragment) n=38 Tax=Microbotryaceae RepID=Q0MX41_9BASI 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 7.132e-31
Putative N-terminus
sp_v3.0_unigene102674 SustainPine v3.0 377
AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 4.42e-29
Internal
sp_v3.0_unigene105343 SustainPine v3.0 313
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene107919 SustainPine v3.0 225
AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene114600 SustainPine v3.0 143
AutoFact: elongation factor-1 alpha [Musa acuminata] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 6.401e-10
Putative C-terminus
sp_v3.0_unigene119540 SustainPine v3.0 461
AutoFact: Elongation factor 1 alpha n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HRH1_AJECH 6.0e-40
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene121393 SustainPine v3.0 166
AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 3.0e-17
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 4.636e-34
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain