Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Elongation factor 1-alpha

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene65901 SustainPine v3.0 143
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-17
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.55e-33
Internal
sp_v3.0_unigene65923 SustainPine v3.0 172
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 9.0e-10
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 8.696e-14
Internal
sp_v3.0_unigene65924 SustainPine v3.0 126
AutoFact: translation elongation factor 1 alpha [Plantago major] 3.0e-07
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 6.67e-06
Putative C-terminus
sp_v3.0_unigene73569 SustainPine v3.0 164
AutoFact: Elongation factor 1-alpha n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0S3L7_PARBP 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 4.836e-22
Putative C-terminus
sp_v3.0_unigene73665 SustainPine v3.0 319
AutoFact: Translation elongation factor 1-alpha (Fragment) n=1 Tax=Macrolepiota mastoidea RepID=F1B353_9AGAR 4.0e-39
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 2.716e-33
Internal
sp_v3.0_unigene73688 SustainPine v3.0 445
AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 6.912e-34
Misassembled
sp_v3.0_unigene73753 SustainPine v3.0 451
AutoFact: translation elongation factor-1 alpha [Picea abies] 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene73900 SustainPine v3.0 420
AutoFact: Elongation factor 1 alpha (Fragment) n=3 Tax=Agaricales RepID=Q2HXZ3_9AGAR 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.638e-25
Internal
sp_v3.0_unigene74031 SustainPine v3.0 226
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 9.0e-16
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.8e-28
Misassembled
sp_v3.0_unigene74555 SustainPine v3.0 379
AutoFact: translation elongation factor-1 alpha [Picea abies] 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 5.3936e-42
Internal
sp_v3.0_unigene74632 SustainPine v3.0 286
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene74709 SustainPine v3.0 302
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 2.0e-40
FL-Next: tr=Elongation factor 1-alpha; Capsicum annuum (Bell pepper). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene74909 SustainPine v3.0 363
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene75097 SustainPine v3.0 381
AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 7.701e-39
Internal
sp_v3.0_unigene75121 SustainPine v3.0 261
AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 4.0e-30
FL-Next: sp=Elongation factor 1-alpha; Manihot esculenta (Cassava) (Jatropha manihot). 0.0
Sma3: Elongation factor 1-alpha 3.78351e-44
Internal
sp_v3.0_unigene75770 SustainPine v3.0 299
AutoFact: putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] dbj|BAH19422.1| AT5G10630 [Arabidopsis thaliana] gb|AED91574.1| putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] 5.0e-35
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 8.789e-09
Internal
sp_v3.0_unigene75854 SustainPine v3.0 467
AutoFact: Elongation factor 1-alpha n=178 Tax=Eukaryota RepID=EF1A_PIRIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene75942 SustainPine v3.0 269
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene76030 SustainPine v3.0 301
AutoFact: Elongation factor 1 alpha (Fragment) n=3 Tax=Eukaryota RepID=A7J577_9LECA 1.99993e-41
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 9.927e-22
Internal
sp_v3.0_unigene76803 SustainPine v3.0 397
AutoFact: Translation elongation factor 1-alpha (Fragment) n=3 Tax=Saccharomycetales RepID=A9QAA2_9ASCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 9.992e-33
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain