Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription factor TFIIA complex

Term: GO:0005672  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene16563 SustainPine v3.0 1983
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor/ transcription initiation factor 5.167e-09
Putative Complete
sp_v3.0_unigene17304 SustainPine v3.0 1950
• AutoFact: Transcription factor IIA, helical [Medicago truncatula] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene19148 SustainPine v3.0 1772
• AutoFact: Transcription factor IIA, helical [Medicago truncatula] 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor/ transcription initiation factor 5.167e-09
Putative Complete
sp_v3.0_unigene20062 SustainPine v3.0 903
• AutoFact: Transcription initiation factor IIA subunit 2 n=1 Tax=Picea sitchensis RepID=A9NRE0_PICSI 0.0
• FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21835 SustainPine v3.0 449
• AutoFact: Transcription initiation factor IIA subunit 2 n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RUT3_PHYPA 4.0e-27
• FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene37853 SustainPine v3.0 2012
• AutoFact: transcription initiation factor TFIIA large subunit [Arabidopsis thaliana] gb|AAL11553.1|AF424559_1 At1g07470/F22G5_13 [Arabidopsis thaliana] gb|AAK64164.1| putative transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAK83596.1| At1g07470/F2 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene79737 SustainPine v3.0 222
• AutoFact: TFIIA domain containing protein 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene137855 SustainPine v3.0 419
• AutoFact: Transcription initiation factor IIA subunit 2 n=1 Tax=Picea sitchensis RepID=A9NRE0_PICSI 3.0e-31
• FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor IIA subunit 2 6.498e-09
N-terminus
sp_v3.0_unigene140600 SustainPine v3.0 503
unknown
sp_v3.0_unigene144104 SustainPine v3.0 243
• AutoFact: Unassigned protein 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene162661 SustainPine v3.0 408
• AutoFact: Transcription initiation factor IIA subunit 2 n=1 Tax=Picea sitchensis RepID=A9NRE0_PICSI 1.0e-24
• FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor IIA subunit 2 6.229e-09
N-terminus
sp_v3.0_unigene202681 SustainPine v3.0 522
• AutoFact: Transcription initiation factor IIA subunit 2 n=1 Tax=Picea sitchensis RepID=A9NRE0_PICSI 2.0e-40
• FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene204501 SustainPine v3.0 461
• AutoFact: Transcription initiation factor IIA subunit 2 n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RUT3_PHYPA 4.0e-27
• FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain