Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cell cycle

Term: GO:0007049  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene129661 SustainPine v3.0 427
AutoFact: CKS1 protein n=3 Tax=Populus RepID=Q8GZU5_9ROSI 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin-dependent kinases regulatory subunit 1.254e-15
C-terminus
sp_v3.0_unigene129820 SustainPine v3.0 338
AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative G2/mitotic-specific cyclin 5.097e-08
C-terminus
sp_v3.0_unigene130141 SustainPine v3.0 266
AutoFact: pfam00350, Dynamin_N, Dynamin family 7.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 1.971e-17
N-terminus
sp_v3.0_unigene130296 SustainPine v3.0 410
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 9.447e-08
Internal
sp_v3.0_unigene130300 SustainPine v3.0 340
AutoFact: Peroxisome biogenesis protein 1 n=2 Tax=Arabidopsis RepID=PEX1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 2.33e-13
Internal
sp_v3.0_unigene130934 SustainPine v3.0 315
AutoFact: Dynamin-related protein 1A n=3 Tax=Poaceae RepID=B6U4J8_MAIZE 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 3.627e-17
Internal
sp_v3.0_unigene131383 SustainPine v3.0 270
AutoFact: putative GTP-binding protein [Oryza sativa Japonica Group] gb|ABF98531.1| Dynamin-related protein 1C, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01687.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC76063.1| hypothetical prote 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 2.008e-24
Internal
sp_v3.0_unigene131419 SustainPine v3.0 507
AutoFact: putative cytosolic factor [Trifolium pratense] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Patellin-5 8.122e-09
Internal
sp_v3.0_unigene131515 SustainPine v3.0 626
AutoFact: D-type cyclin [Saccharum hybrid cultivar ROC16] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin d, putative 4.662e-18
Putative N-terminus
sp_v3.0_unigene132276 SustainPine v3.0 369
AutoFact: cell division control protein 48-D [Arabidopsis thaliana] sp|Q9SCN8.1|CD48D_ARATH RecName: Full=Cell division control protein 48 homolog D; Short=AtCDC48d; AltName: Full=Transitional endoplasmic reticulum ATPase D emb|CAB64226.1| CDC48-like protein [Arabi 1.0e-24
FL-Next: sp=Cell division control protein 48 homolog D; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cell division cycle protein 48 homolog 3.757e-12
C-terminus
sp_v3.0_unigene132381 SustainPine v3.0 334
AutoFact: Retinoblastoma-related protein 1 n=2 Tax=Oryza sativa RepID=RBR1_ORYSJ 6.0e-37
FL-Next: sp=Retinoblastoma-related protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Retinoblastoma-related protein 1 5.199e-19
Internal
sp_v3.0_unigene132469 SustainPine v3.0 459
AutoFact: CUL1 n=9 Tax=Poaceae RepID=Q5ZC88_ORYSJ 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene132534 SustainPine v3.0 207
AutoFact: similar to dynamin-like protein encoded by GenBank Accession Number X99669 [Arabidopsis thaliana] 9.0e-15
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Dynamin, putative 1.661e-07
Internal
sp_v3.0_unigene132736 SustainPine v3.0 443
AutoFact: DNA replication licensing factor MCM8 [Mus musculus] gb|AAH52070.1| Minichromosome maintenance deficient 8 (S. cerevisiae) [Mus musculus] emb|CAM26898.1| minichromosome maintenance deficient 8 (S. cerevisiae) [Mus musculus] 2.00386e-43
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA replication licensing factor, MCM5 component (ISS) 3.573e-07
Internal
sp_v3.0_unigene133439 SustainPine v3.0 402
AutoFact: Putative cullin [Oryza sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 7.636e-08
Internal
sp_v3.0_unigene133676 SustainPine v3.0 510
AutoFact: PREG-like protein (Fragment) n=1 Tax=Picea mariana RepID=O65065_PICMA 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PREG-like protein 4.642e-08
Putative C-terminus
sp_v3.0_unigene133680 SustainPine v3.0 628
AutoFact: PREG-like protein (Fragment) n=1 Tax=Picea mariana RepID=O65065_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PREG-like protein 1.354e-12
C-terminus
sp_v3.0_unigene134203 SustainPine v3.0 262
AutoFact: cell division control protein 48-A [Arabidopsis thaliana] sp|P54609.1|CD48A_ARATH RecName: Full=Cell division control protein 48 homolog A; Short=AtCDC48a gb|AAF23260.1|AC015985_18 putative transitional endoplasmic reticulum ATPase [Arabidopsis thaliana] 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 homolog 4.274e-12
N-terminus
sp_v3.0_unigene136009 SustainPine v3.0 249
AutoFact: cell division control protein 48-B [Arabidopsis thaliana] sp|Q9ZPR1.1|CD48B_ARATH RecName: Full=Cell division control protein 48 homolog B; Short=AtCDC48b gb|AAD20084.1| putative AAA-type ATPase [Arabidopsis thaliana] gb|AAL32521.1| putative AAA-type ATPa 1.0e-16
FL-Next: sp=Cell division control protein 48 homolog B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene137213 SustainPine v3.0 252
AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CycB2 9.83e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain