Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cell cycle

Term: GO:0007049  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene108801 SustainPine v3.0 604
AutoFact: Ataxia telangiectasia mutated, putative n=1 Tax=Ricinus communis RepID=B9RB21_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Target of rapamycin kinase 1.134e-11
Putative N-terminus
sp_v3.0_unigene111913 SustainPine v3.0 365
AutoFact: SNARE-interacting protein KEULE [Arabidopsis thaliana] sp|Q9C5X3.2|KEULE_ARATH RecName: Full=SNARE-interacting protein KEULE dbj|BAE99577.1| hypothetical protein [Arabidopsis thaliana] gb|AEE28870.1| SNARE-interacting protein KEULE [Arabidopsis thaliana] 8.00141e-43
FL-Next: sp=SNARE-interacting protein KEULE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNARE-interacting protein KEULE 3.244e-13
Internal
sp_v3.0_unigene112165 SustainPine v3.0 347
AutoFact: similar to dynamin-like protein encoded by GenBank Accession Number X99669 [Arabidopsis thaliana] 3.0e-07
FL-Next: Isoform 2 of Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A 0.0
N-terminus
sp_v3.0_unigene112903 SustainPine v3.0 456
AutoFact: cyclin A [Scutellaria baicalensis] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin 1.329e-29
Internal
sp_v3.0_unigene113848 SustainPine v3.0 529
AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CycB2 2.365e-22
C-terminus
sp_v3.0_unigene116126 SustainPine v3.0 268
AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene117310 SustainPine v3.0 341
AutoFact: PREG-like protein [Picea mariana] 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuc-1 negative regulatory protein preg, putative 2.121e-09
Putative Complete
sp_v3.0_unigene118324 SustainPine v3.0 212
AutoFact: GlimmerM protein 276 n=1 Tax=Beta vulgaris RepID=Q20CC6_BETVU 3.0e-24
FL-Next: sp=Serine/threonine-protein kinase ATR; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Serine/threonine-protein kinase ATR 1.251e-08
Internal
sp_v3.0_unigene121612 SustainPine v3.0 1151
AutoFact: Patellin-6, putative n=1 Tax=Ricinus communis RepID=B9SL24_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Patellin-5 4.094e-08
C-terminus
sp_v3.0_unigene124006 SustainPine v3.0 409
AutoFact: DNA ligase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSX4_VITVI 7.0e-28
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Sma3: DNA ligase 2.193e-16
C-terminus
sp_v3.0_unigene124789 SustainPine v3.0 412
AutoFact: cullin-like protein [Oryza sativa Japonica Group] gb|AAQ01196.1| CUL1 [Oryza sativa Japonica Group] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 7.054e-08
Internal
sp_v3.0_unigene125229 SustainPine v3.0 375
AutoFact: putative cell division control protein [Arabidopsis thaliana] 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 homolog 2.473e-10
Internal
sp_v3.0_unigene125917 SustainPine v3.0 309
AutoFact: serine/threonine-protein kinase ATR [Arabidopsis thaliana] sp|Q9FKS4.2|ATR_ARATH RecName: Full=Serine/threonine-protein kinase ATR; Short=AtATR; AltName: Full=Ataxia telangiectasia-mutated and Rad3-related homolog; AltName: Full=DNA repair protein ATR; Al 1.0e-37
FL-Next: sp=Serine/threonine-protein kinase ATR; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Serine/threonine-protein kinase ATR 1.701e-08
Internal
sp_v3.0_unigene126123 SustainPine v3.0 359
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T479_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 homolog 3.149e-11
Internal
sp_v3.0_unigene126865 SustainPine v3.0 807
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin 1.275e-10
Internal
sp_v3.0_unigene126905 SustainPine v3.0 733
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.575e-08
Internal
sp_v3.0_unigene127059 SustainPine v3.0 642
AutoFact: cullin 1A [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.687e-08
Internal
sp_v3.0_unigene127325 SustainPine v3.0 1791
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Sma3: TIR1-like protein 7.744e-20
C-terminus
sp_v3.0_unigene127950 SustainPine v3.0 815
AutoFact: Cullin-4 n=2 Tax=Arabidopsis RepID=CUL4_ARATH 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin 8.434e-18
Misassembled
sp_v3.0_unigene129477 SustainPine v3.0 585
AutoFact: Putative cullin [Oryza sativa] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin protein 5.815e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain