Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr2 scaffold_176, whole genome shotgun sequence

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2961 SustainPine v3.0 2000
• AutoFact: RecName: Full=UDP-glucose 4-epimerase GEPI48; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase emb|CAA06339.1| UDP-galactose 4-epimerase [Cyamopsis tetragonoloba] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene5059 SustainPine v3.0 829
• AutoFact: cellulose synthase-like protein CslG [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 2.791e-13
C-terminus
sp_v3.0_unigene7485 SustainPine v3.0 2969
• AutoFact: ABC transporter F family member 3 [Arabidopsis thaliana] sp|Q8H0V6.1|AB3F_ARATH RecName: Full=ABC transporter F family member 3; Short=ABC transporter ABCF.3; Short=AtABCF3; AltName: Full=GCN20-type ATP-binding cassette protein GCN3 gb|AAN72026.1| ABC tra 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene8503 SustainPine v3.0 2014
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized protein At4g10930; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 2.092e-07
C-terminus
sp_v3.0_unigene11038 SustainPine v3.0 1361
• AutoFact: cellulose synthase-like protein E1 [Arabidopsis thaliana] sp|Q8VZK9.1|CSLE1_ARATH RecName: Full=Cellulose synthase-like protein E1; Short=AtCslE1 gb|AAL36396.1| putative cellulose synthase catalytic subunit [Arabidopsis thaliana] dbj|BAE99166.1| putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 2.34e-17
C-terminus
sp_v3.0_unigene17840 SustainPine v3.0 2495
• AutoFact: heat shock protein 70 [Cucumis sativus] 0.0
• FL-Next: sp=Luminal-binding protein; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene37173 SustainPine v3.0 1030
• AutoFact: Cellulose synthase, putative n=1 Tax=Ricinus communis RepID=B9S9W0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 1.904e-25
C-terminus
sp_v3.0_unigene37551 SustainPine v3.0 1414
• AutoFact: cellulose synthase-like protein E1 [Arabidopsis thaliana] sp|Q8VZK9.1|CSLE1_ARATH RecName: Full=Cellulose synthase-like protein E1; Short=AtCslE1 gb|AAL36396.1| putative cellulose synthase catalytic subunit [Arabidopsis thaliana] dbj|BAE99166.1| putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 6.299e-20
C-terminus
sp_v3.0_unigene96457 SustainPine v3.0 1750
• AutoFact: RecName: Full=UDP-glucose 4-epimerase GEPI48; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase emb|CAA06339.1| UDP-galactose 4-epimerase [Cyamopsis tetragonoloba] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene119615 SustainPine v3.0 526
• AutoFact: RecName: Full=Cellulose synthase-like protein E6; AltName: Full=OsCslE6 dbj|BAD46391.1| putative cellulose synthase-like protein OsCslE1 [Oryza sativa Japonica Group] 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 1.747e-23
Internal
sp_v3.0_unigene128762 SustainPine v3.0 540
• AutoFact: RecName: Full=Cellulose synthase-like protein E6; AltName: Full=OsCslE6 dbj|BAD46391.1| putative cellulose synthase-like protein OsCslE1 [Oryza sativa Japonica Group] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 3.553e-07
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain