Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ribonucleoprotein complex

Term: GO:0030529  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene154812 SustainPine v3.0 403
• AutoFact: 60S ribosomal protein L7a [Theileria parva strain Muguga] gb|EAN32369.1| 60S ribosomal protein L7a, putative [Theileria parva] 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.186e-08
C-terminus
sp_v3.0_unigene155075 SustainPine v3.0 416
• AutoFact: Small nuclear ribonucleoprotein D2-like protein n=6 Tax=Coelomata RepID=Q8MUE3_9BIVA 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small nuclear ribonucleoprotein sm d2, putative 4.755e-09
Putative Complete
sp_v3.0_unigene155385 SustainPine v3.0 352
• AutoFact: Nucleolar protein, small subunit of H/ACA snoRNPs n=3 Tax=Chlamydomonadales RepID=A8JB67_CHLRE 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene155415 SustainPine v3.0 553
• AutoFact: U1 small nuclear ribonucleoprotein C n=1 Tax=Salmo salar RepID=B5XBE7_SALSA 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene155440 SustainPine v3.0 485
• AutoFact: putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis thaliana] 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative U1 small nuclear ribonucleoprotein 70 kDa 2.438e-09
Putative Complete
sp_v3.0_unigene155464 SustainPine v3.0 223
• AutoFact: MGC80249 protein n=1 Tax=Xenopus laevis RepID=Q6GQ93_XENLA 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small nuclear ribonucleoprotein E 2.419e-12
N-terminus
sp_v3.0_unigene155469 SustainPine v3.0 524
• AutoFact: Small nuclear ribonucleoprotein Sm D2 n=3 Tax=Sordariomycetes RepID=E9FA82_METAR 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small nuclear ribonucleoprotein sm d2, putative 4.755e-09
Putative Complete
sp_v3.0_unigene155498 SustainPine v3.0 366
• AutoFact: ribosomal protein l7ae [Aedes aegypti] ref|XP_001847839.1| 13 kDa ribonucleoprotein-associated protein [Culex quinquefasciatus] gb|ABF18367.1| 60S ribosomal protein 15.5kD/SNU13 [Aedes aegypti] gb|EAT45362.1| ribosomal protein l7ae [Aedes aegypti] gb|EDS2 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 3.279e-08
N-terminus
sp_v3.0_unigene155554 SustainPine v3.0 486
• AutoFact: PREDICTED: similar to Nucleolar protein 5, partial [Ornithorhynchus anatinus] 0.0
• FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Nucleolar protein nop56, putative 1.201e-11
Internal
sp_v3.0_unigene155590 SustainPine v3.0 188
• AutoFact: 60S ribosomal protein L7A (Fragment) n=1 Tax=Cimex lectularius RepID=D1FPH5_CIMLE 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene155618 SustainPine v3.0 458
• AutoFact: 60S ribosomal protein L7a-2 [Arabidopsis thaliana] sp|Q9LZH9.1|RL7A2_ARATH RecName: Full=60S ribosomal protein L7a-2 emb|CAB83137.1| 60S RIBOSOMAL PROTEIN L7A protein [Arabidopsis thaliana] gb|AAK97734.1| AT3g62870/F26K9_300 [Arabidopsis thaliana] gb|AAL3 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.478e-08
Internal
sp_v3.0_unigene155650 SustainPine v3.0 333
• AutoFact: Ribosomal protein S4, putative n=2 Tax=Plasmodium (Vinckeia) RepID=Q4Z002_PLABA 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small nucleolar ribonucleoprotein U3 component 6.335e-06
Putative N-terminus
sp_v3.0_unigene155854 SustainPine v3.0 530
• AutoFact: DUF1777 multi-domain protein 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene155907 SustainPine v3.0 251
• AutoFact: U3 small nucleolar ribonucleoprotein protein IMP3 p n=1 Tax=Albugo laibachii Nc14 RepID=F0W7J4_9STRA 8.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein-like 1.666e-06
Putative C-terminus
sp_v3.0_unigene156045 SustainPine v3.0 514
• AutoFact: Nucleolar protein-like protein 5A n=1 Tax=Daphnia pulex RepID=E9H9X9_DAPPU 0.0
• FL-Next: sp=Probable nucleolar protein 5-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Nucleolar protein nop56, putative 1.201e-11
Internal
sp_v3.0_unigene156069 SustainPine v3.0 248
• AutoFact: 60S ribosomal protein L7A, putative n=2 Tax=Sarcocystidae RepID=B9PKF7_TOXGO 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.062e-08
Internal
sp_v3.0_unigene156295 SustainPine v3.0 233
• AutoFact: Ribosomal protein L7Ae n=1 Tax=Cicindela littoralis RepID=Q4GXM0_CICLT 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a 4.958e-08
Putative N-terminus
sp_v3.0_unigene156317 SustainPine v3.0 221
• AutoFact: ribosomal protein L7a [Xenopus (Silurana) tropicalis] gb|AAI18909.1| hypothetical protein LOC447981 [Xenopus (Silurana) tropicalis] 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 9.643e-09
Internal
sp_v3.0_unigene156361 SustainPine v3.0 330
• AutoFact: 60S ribosomal protein L8 (L7A) (L4) n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6RE46_CRYGW 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 9.835e-09
Internal
sp_v3.0_unigene156558 SustainPine v3.0 407
• AutoFact: 60S ribosomal protein L7a, putative n=3 Tax=Onchocercidae RepID=A8P4H1_BRUMA 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 8.71e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain