Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chlorophyll binding

Term: GO:0016168  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene146411 SustainPine v3.0 732
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 3.606e-31
N-terminus
sp_v3.0_unigene146429 SustainPine v3.0 426
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.239e-26
Internal
sp_v3.0_unigene146464 SustainPine v3.0 453
• AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 6.0e-35
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 3.794e-21
Internal
sp_v3.0_unigene146485 SustainPine v3.0 506
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.265e-38
Internal
sp_v3.0_unigene146504 SustainPine v3.0 647
• AutoFact: Chlorophyll a-b binding protein 2, chloroplastic n=1 Tax=Glycine max RepID=CB22_SOYBN 0.0
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 7.15e-22
Putative Complete
sp_v3.0_unigene146576 SustainPine v3.0 542
• AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 8.00141e-43
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 1.177e-21
Putative C-terminus
sp_v3.0_unigene146626 SustainPine v3.0 821
• AutoFact: Chlorophyll a-b binding protein type 2 member 2 (Fragment) n=5 Tax=Coniferales RepID=CB22_PINSY 8.0e-38
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.267e-21
Misassembled
sp_v3.0_unigene146658 SustainPine v3.0 469
• AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 4.763e-31
Putative C-terminus
sp_v3.0_unigene146693 SustainPine v3.0 266
• AutoFact: Chlorophyll A/B binding protein n=1 Tax=Jatropha curcas RepID=D0F1Q5_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.527e-26
Internal
sp_v3.0_unigene148239 SustainPine v3.0 362
• AutoFact: Type 1 chlorophyll a /b-binding protein (Fragment) n=1 Tax=Pinus sylvestris RepID=Q7DM40_PINSY 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Light-harvesting complex I protein Lhca1 9.077e-09
C-terminus
sp_v3.0_unigene149769 SustainPine v3.0 221
• AutoFact: Light-harvesting complex II protein Lhcb1 n=2 Tax=Magnoliophyta RepID=B9I107_POPTR 3.0e-35
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 2.229e-36
Internal
sp_v3.0_unigene150893 SustainPine v3.0 223
• AutoFact: LHCII Type III chlorophyll a/b binding protein [Brassica napus] 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 3.375e-21
Putative C-terminus
sp_v3.0_unigene154811 SustainPine v3.0 553
• AutoFact: Chloroplast light-harvesting protein CP29 Lhcb4 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ4_ACEAT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Light-harvesting chlorophyll-a/b binding protein Lhcb4 1.455e-08
Internal
sp_v3.0_unigene155394 SustainPine v3.0 311
• AutoFact: Photosystem I P700 chlorophyll a apoprotein (Fragment) n=1 Tax=Pseudochlorella sp. CCAP 211/1A RepID=B9TU94_CHLEL 0.0
• FL-Next: sp=Photosystem I P700 chlorophyll a apoprotein A2; Cathaya argyrophylla. Plastid; Chloroplast. 0.0
• Sma3: P700 chlorophyll a-apoprotein A2 0.0
Internal
sp_v3.0_unigene155529 SustainPine v3.0 276
• AutoFact: Light-harvesting chlorophyll-a/b protein of photosystem I n=3 Tax=Chlamydomonadales RepID=Q75VY8_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Light-harvesting chlorophyll-a/b protein of photosystem I 3.272e-14
Internal
sp_v3.0_unigene156560 SustainPine v3.0 414
• AutoFact: Chlorophyll a-b binding protein type 1 member F3, chloroplastic n=2 Tax=Polypodiales RepID=CB23_POLMU 0.0
• FL-Next: tr=Light-harvesting chlorophyll a/b-binding protein of photosystem II; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: LHCP 3.607e-29
Putative C-terminus
sp_v3.0_unigene156739 SustainPine v3.0 383
• AutoFact: Major light-harvesting complex II protein m10 n=1 Tax=Chlamydomonas reinhardtii RepID=Q8S3U0_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.805e-21
Putative N-terminus
sp_v3.0_unigene157302 SustainPine v3.0 242
• AutoFact: Light-harvesting protein of photosystem I n=4 Tax=Chlamydomonadales RepID=D8UIW8_VOLCA 2.0e-16
• FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 7.021e-25
C-terminus
sp_v3.0_unigene188236 SustainPine v3.0 647
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=5 Tax=Brassicaceae RepID=PSBS_ARATH 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II 22 kDa protein, chloroplastic 3.485e-16
C-terminus
sp_v3.0_unigene202182 SustainPine v3.0 850
• AutoFact: Phosphatidylcholine transfer protein, putative n=1 Tax=Ricinus communis RepID=B9RYW5_RICCO 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type III chlorophyll a/b-binding protein 5.009e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain