Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene35912 SustainPine v3.0 486
AutoFact: Nucleoside diphosphate kinase n=9 Tax=Geobacillus RepID=NDK_GEOKA 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
C-terminus
sp_v3.0_unigene36256 SustainPine v3.0 659
AutoFact: Glutathione S-transferase-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E5F6M4_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 0.0
Putative N-terminus
sp_v3.0_unigene36344 SustainPine v3.0 1098
AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene36428 SustainPine v3.0 752
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 0.0
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 0.0
C-terminus
sp_v3.0_unigene36452 SustainPine v3.0 548
AutoFact: Photosystem II 22 kDa protein, chloroplastic n=5 Tax=Brassicaceae RepID=PSBS_ARATH 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem II 22 kDa protein, chloroplastic 3.412e-16
C-terminus
sp_v3.0_unigene36475 SustainPine v3.0 660
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Wound/stress protein 2.315e-13
C-terminus
sp_v3.0_unigene37001 SustainPine v3.0 344
AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Early light-induced protein 6.378e-19
C-terminus
sp_v3.0_unigene37180 SustainPine v3.0 800
AutoFact: putative FtsH protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene37221 SustainPine v3.0 311
AutoFact: Ribulose-phosphate 3-epimerase n=1 Tax=Ricinus communis RepID=B9RLW1_RICCO 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose-phosphate 3-epimerase, chloroplastic 2.848e-13
Internal
sp_v3.0_unigene37289 SustainPine v3.0 3845
AutoFact: PREDICTED: similar to cell division protein FtsH-like n=1 Tax=Vitis vinifera RepID=UPI0001983FB9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 2.673e-11
Complete
sp_v3.0_unigene37530 SustainPine v3.0 1598
AutoFact: [U] COG0706 Preprotein translocase subunit YidC 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inner membrane protein ALBINO3 1.362e-08
N-terminus
sp_v3.0_unigene37843 SustainPine v3.0 899
AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 1.816e-13
C-terminus
sp_v3.0_unigene38240 SustainPine v3.0 1548
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene38517 SustainPine v3.0 1302
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBQ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene38536 SustainPine v3.0 2003
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 2.096e-06
Putative Complete
sp_v3.0_unigene38542 SustainPine v3.0 1016
AutoFact: DUF659 domain containing protein 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene38577 SustainPine v3.0 971
AutoFact: DUF659 domain containing protein 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene38602 SustainPine v3.0 2294
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene39288 SustainPine v3.0 372
AutoFact: Protein translocase subunit secA n=1 Tax=Ricinus communis RepID=B9RN40_RICCO 0.0
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Spinacia oleracea (Spinach). 0.0
Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene39325 SustainPine v3.0 489
AutoFact: ribulose-phosphate 3-epimerase mature form [Expression vector pFL506] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose-phosphate 3-epimerase 3.812e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain