Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene32439 SustainPine v3.0 599
• AutoFact: ribosomal protein L27-like [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L27, chloroplastic 1.96182e-44
Putative Complete
sp_v3.0_unigene32621 SustainPine v3.0 742
• AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 0.0
C-terminus
sp_v3.0_unigene32634 SustainPine v3.0 515
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene32749 SustainPine v3.0 718
• AutoFact: Peroxiredoxin 2 n=4 Tax=Percomorpha RepID=A9QKS0_9SCOM 0.0
• FL-Next: tr=2-cys peroxiredoxin; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Sma3: Thioredoxin peroxidase 8.267e-16
Complete
sp_v3.0_unigene32938 SustainPine v3.0 816
• AutoFact: NADH-ubiquinone oxidoreductase chain 2 n=34 Tax=Magnoliophyta RepID=NU2M_ARATH 0.0
• FL-Next: sp=NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic 1; Thuja plicata (Western red-cedar) (Giant arborvitae). Plastid; Chloroplast. 0.0
• Sma3: NADH dehydrogenase subunit 2 5.992e-36
C-terminus
sp_v3.0_unigene33050 SustainPine v3.0 573
• AutoFact: chlorophyll a/b-binding protein [Pinus thunbergii] 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.205e-18
Internal
sp_v3.0_unigene33198 SustainPine v3.0 637
• AutoFact: pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Quinone oxidoreductase-like protein 5.248e-07
C-terminus
sp_v3.0_unigene33300 SustainPine v3.0 908
• AutoFact: Phi class glutathione transferase n=1 Tax=Cathaya argyrophylla RepID=B8YDC4_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene33589 SustainPine v3.0 598
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Putative Complete
sp_v3.0_unigene33649 SustainPine v3.0 892
• AutoFact: Phi class glutathione transferase n=1 Tax=Cathaya argyrophylla RepID=B8YDC4_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 0.0
Putative Complete
sp_v3.0_unigene34159 SustainPine v3.0 1053
• AutoFact: Chlorophyll A/B binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 3.07e-33
Complete
sp_v3.0_unigene34288 SustainPine v3.0 905
• AutoFact: putative anion transporter 6 [Arabidopsis thaliana] sp|Q3E9A0.1|ANTR6_ARATH RecName: Full=Probable anion transporter 6, chloroplastic; AltName: Full=Phosphate transporter PHT4;5; Flags: Precursor gb|AED92837.1| putative anion transporter 6 [Arabidopsis th 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Major facilitator superfamily 9.578e-11
Internal
sp_v3.0_unigene34702 SustainPine v3.0 578
• AutoFact: Alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SHB0_RICCO 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Quinone oxidoreductase-like protein 3.076e-07
Putative C-terminus
sp_v3.0_unigene34834 SustainPine v3.0 954
• AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 0.0
• FL-Next: tr=Lhcb5 protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 1.747e-20
N-terminus
sp_v3.0_unigene34944 SustainPine v3.0 1186
• AutoFact: Glutathione S-transferase-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E5F6M4_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene35045 SustainPine v3.0 673
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid-specific 30S ribosomal protein 2 9.67e-09
Putative N-terminus
sp_v3.0_unigene35543 SustainPine v3.0 585
• AutoFact: [J] COG0251 Putative translation initiation inhibitor, yjgF family 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene35609 SustainPine v3.0 701
• AutoFact: Alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SHB0_RICCO 8.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Quinone oxidoreductase-like protein 3.076e-07
N-terminus
sp_v3.0_unigene35822 SustainPine v3.0 447
• AutoFact: Major light-harvesting chlorophyll a/b protein 3 n=1 Tax=Dunaliella salina RepID=A8BDJ0_DUNSA 2.0e-28
• FL-Next: tr=Light harvesting chlorophyll a /b-binding protein Lhcb1*1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: LHCP 5.87985e-42
C-terminus
sp_v3.0_unigene35852 SustainPine v3.0 377
• AutoFact: NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) [Xenopus (Silurana) tropicalis] gb|AAI21597.1| hypothetical protein MGC147194 [Xenopus (Silurana) tropicalis] 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NADH dehydrogenase subunit 10 8.939e-20
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain