Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene208393 SustainPine v3.0 389
• AutoFact: enoyl-ACP reductase [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Enoyl-ACP reductase 7.568e-28
Internal
sp_v3.0_unigene208394 SustainPine v3.0 380
• AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PSI-E 1.083e-23
Complete
sp_v3.0_unigene208473 SustainPine v3.0 669
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene208497 SustainPine v3.0 382
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus
sp_v3.0_unigene208511 SustainPine v3.0 471
• AutoFact: RuBisCO subunit binding-protein beta subunit precursor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 2.34e-10
C-terminus
sp_v3.0_unigene208531 SustainPine v3.0 602
• AutoFact: Photosystem I reaction center subunit psaK, chloroplastic n=3 Tax=BEP clade RepID=PSAK_HORVU 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem I subunit X 3.742e-14
Complete
sp_v3.0_unigene208688 SustainPine v3.0 376
• AutoFact: Superoxide dismutase [Cu-Zn] n=2 Tax=Pinus sylvestris RepID=Q9AR80_PINSY 1.0e-22
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
C-terminus
sp_v3.0_unigene208795 SustainPine v3.0 204
• AutoFact: RecName: Full=Thylakoid lumenal 19 kDa protein, chloroplastic; AltName: Full=P19; Flags: Precursor gb|ADM35939.1| chloroplast luminal 19 kDa protein [Arabidopsis thaliana] gb|ADM35940.1| chloroplast luminal 19 kDa protein [Arabidopsis thaliana] 7.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene208960 SustainPine v3.0 763
• AutoFact: cold-related protein Cor413 [Gossypium barbadense] gb|ABI97481.1| COR413-like protein [Gossypium barbadense] 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cold acclimation protein WCOR413-like protein 4.994e-17
Putative Complete
sp_v3.0_unigene209121 SustainPine v3.0 560
• AutoFact: RuBisCO subunit binding-protein beta subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q56ZP2_ARATH 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 1.148e-10
C-terminus
sp_v3.0_unigene209174 SustainPine v3.0 705
• AutoFact: putative glutathione S-transferase OsGSTF3 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 1.10703e-43
Putative Complete
sp_v3.0_unigene209229 SustainPine v3.0 263
• AutoFact: Light-harvesting chlorophyll a/b binding protein of photosystem II n=1 Tax=Ginkgo biloba RepID=Q39768_GINBI 1.0e-39
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 3.374e-29
Putative C-terminus
sp_v3.0_unigene209309 SustainPine v3.0 433
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Wound/stress protein 2.315e-13
C-terminus
sp_v3.0_unigene209335 SustainPine v3.0 763
• AutoFact: 78 kDa glucose-regulated protein precursor [Neurospora crassa OR74A] sp|P78695.3|GRP78_NEUCR RecName: Full=78 kDa glucose-regulated protein homolog; Short=GRP-78; AltName: Full=Immunoglobulin heavy chain-binding protein homolog; Short=BiP; Flags: Precurso 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
C-terminus
sp_v3.0_unigene209629 SustainPine v3.0 789
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBQ7_RICCO 0.0
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene209731 SustainPine v3.0 687
• AutoFact: Photosystem II reaction center W protein, chloroplastic n=1 Tax=Spinacia oleracea RepID=PSBW_SPIOL 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II reaction center W protein, chloroplastic 7.999e-13
Putative Complete
sp_v3.0_unigene210236 SustainPine v3.0 895
• AutoFact: PREDICTED: similar to ftsH-like protease n=1 Tax=Vitis vinifera RepID=UPI0001982E96 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protease ftsH homolog 4, mitochondrial 5.124e-08
Complete
sp_v3.0_unigene210372 SustainPine v3.0 254
• AutoFact: Triosephosphate isomerase n=1 Tax=Picea sitchensis RepID=A9NRN6_PICSI 3.0e-22
• FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triosephosphate isomerase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain