Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene143664 SustainPine v3.0 443
• AutoFact: Translationally-controlled tumor protein homolog n=4 Tax=Pinaceae RepID=TCTP_PSEMZ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translationally-controlled tumor protein homolog 0.0
Putative Complete
sp_v3.0_unigene143667 SustainPine v3.0 184
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 4.0e-18
• FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 9.277e-22
Internal
sp_v3.0_unigene143674 SustainPine v3.0 263
• AutoFact: Transketolase, chloroplastic n=1 Tax=Solanum tuberosum RepID=TKTC_SOLTU 7.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TK 7.622e-23
Internal
sp_v3.0_unigene143730 SustainPine v3.0 973
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 2.527e-26
Complete
sp_v3.0_unigene143805 SustainPine v3.0 1471
• AutoFact: Annexin P35 n=1 Tax=Elaeis guineensis RepID=B3TLY9_ELAGV 0.0
• FL-Next: sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Annexin 6.334e-28
Putative Complete
sp_v3.0_unigene143931 SustainPine v3.0 455
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=Q944B7_PINPS 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus pinaster (Maritime pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
C-terminus
sp_v3.0_unigene143948 SustainPine v3.0 463
• AutoFact: Putative early light-induced protein (Fragment) n=1 Tax=Cupressus sempervirens RepID=B6V6N2_9CONI 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ELIP 2.459e-21
C-terminus
sp_v3.0_unigene144001 SustainPine v3.0 462
• AutoFact: Triosephosphate isomerase n=1 Tax=Picea sitchensis RepID=A9NRN6_PICSI 9.0e-37
• FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triosephosphate isomerase 0.0
C-terminus
sp_v3.0_unigene144139 SustainPine v3.0 275
• AutoFact: Glutathione S-transferase-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZD18_PICSI 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 2.007e-14
C-terminus
sp_v3.0_unigene144280 SustainPine v3.0 561
• AutoFact: pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Quinone oxidoreductase-like protein 5.675e-07
Internal
sp_v3.0_unigene144373 SustainPine v3.0 663
• AutoFact: chlorophyll a/b-binding protein CP26 precursor - maize [Oryza sativa Japonica Group] gb|ABA92340.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Lhcb5 protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Chlorophyll a-b binding protein of LHCII 7.348e-14
Putative N-terminus
sp_v3.0_unigene144455 SustainPine v3.0 320
• AutoFact: annexin [Gossypium hirsutum] 9.0e-19
• FL-Next: sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Annexin 1.191e-19
C-terminus
sp_v3.0_unigene144475 SustainPine v3.0 350
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 5.494e-16
N-terminus
sp_v3.0_unigene144500 SustainPine v3.0 489
• AutoFact: Translationally-controlled tumor protein homolog n=4 Tax=Pinaceae RepID=TCTP_PSEMZ 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translationally-controlled tumor protein homolog 0.0
Putative N-terminus
sp_v3.0_unigene144614 SustainPine v3.0 350
• AutoFact: ATP synthase subunit beta n=1 Tax=Nicotiana sylvestris RepID=Q9ZR78_NICSY 2.0e-35
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta 1.21e-10
Misassembled
sp_v3.0_unigene144632 SustainPine v3.0 565
• AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.392e-16
Putative Complete
sp_v3.0_unigene144938 SustainPine v3.0 562
• AutoFact: Unassigned protein
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 9.228e-06
Internal
sp_v3.0_unigene144963 SustainPine v3.0 390
• AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 6.163e-31
Internal
sp_v3.0_unigene145034 SustainPine v3.0 466
• AutoFact: Triosephosphate isomerase n=1 Tax=Picea sitchensis RepID=A9NRN6_PICSI 4.2039e-45
• FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triosephosphate isomerase 0.0
Internal
sp_v3.0_unigene145305 SustainPine v3.0 554
• AutoFact: Translationally controlled tumor protein n=2 Tax=Salvia miltiorrhiza RepID=A8VRK8_SALMI 5.99994e-41
• FL-Next: sp=Translationally-controlled tumor protein homolog; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Translationally-controlled tumor protein homolog 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain