Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene141161 SustainPine v3.0 381
• AutoFact: pfam01042, Ribonuc_L-PSP, Endoribonuclease L-PSP 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene141253 SustainPine v3.0 417
• AutoFact: Ribulose-phosphate 3-epimerase, chloroplastic n=1 Tax=Spinacia oleracea RepID=RPE_SPIOL 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentose-5-phosphate 3-epimerase 2.497e-16
C-terminus
sp_v3.0_unigene141335 SustainPine v3.0 288
• AutoFact: DUF659 domain containing protein 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene141693 SustainPine v3.0 235
• AutoFact: Chaperonin 60 alpha subunit (Fragment) n=2 Tax=fabids RepID=E3NYT8_9FABA 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CPN-60 alpha 6.309e-22
Internal
sp_v3.0_unigene141735 SustainPine v3.0 296
• AutoFact: quinone oxidoreductase-like protein [Arabidopsis thaliana] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene141901 SustainPine v3.0 337
• AutoFact: Glycine cleavage system H protein, mitochondrial n=1 Tax=Mesembryanthemum crystallinum RepID=GCSH_MESCR 1.0e-16
• FL-Next: tr=Mitochondrial glycine decarboxylase complex H-protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: Glycine cleavage system H protein, mitochondrial 4.287e-11
N-terminus
sp_v3.0_unigene142002 SustainPine v3.0 493
• AutoFact: quinone oxidoreductase-like protein [Arabidopsis thaliana] sp|Q9ZUC1.2|QORL_ARATH RecName: Full=Quinone oxidoreductase-like protein At1g23740, chloroplastic; Flags: Precursor gb|AAL06488.1|AF411799_1 At1g23740/F5O8_27 [Arabidopsis thaliana] gb|AAM16188.1| 7.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Quinone oxidoreductase-like protein 5.248e-07
N-terminus
sp_v3.0_unigene142247 SustainPine v3.0 1063
• AutoFact: Heat shock cognate 70 kDa protein n=7 Tax=Magnoliophyta RepID=HSP7C_PETHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene142424 SustainPine v3.0 578
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene142434 SustainPine v3.0 741
• AutoFact: Thiazole biosynthetic enzyme n=9 Tax=Pinaceae RepID=Q3V7W7_PSEMZ 0.0
• FL-Next: tr=Thiazole biosynthetic enzyme; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Thiazole biosynthetic enzyme 2.042e-17
N-terminus
sp_v3.0_unigene142521 SustainPine v3.0 525
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene142738 SustainPine v3.0 515
• AutoFact: Chlorophyll a-b binding protein type 2 member 2 (Fragment) n=5 Tax=Coniferales RepID=CB22_PINSY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.361e-29
C-terminus
sp_v3.0_unigene142806 SustainPine v3.0 240
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.392e-16
C-terminus
sp_v3.0_unigene143045 SustainPine v3.0 282
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 5.0e-23
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene143140 SustainPine v3.0 1007
• AutoFact: Translationally-controlled tumor protein homolog n=4 Tax=Triticeae RepID=TCTP_HORVU 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translationally-controlled tumor protein homolog 0.0
Putative Complete
sp_v3.0_unigene143343 SustainPine v3.0 531
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene143397 SustainPine v3.0 510
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Putative Complete
sp_v3.0_unigene143436 SustainPine v3.0 364
• AutoFact: CuZn-superoxide dismutase 3 n=2 Tax=Haberlea rhodopensis RepID=F1CYZ2_9LAMI 1.0e-21
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete
sp_v3.0_unigene143480 SustainPine v3.0 606
• AutoFact: Perchloric acid soluble translation inhibitor protein homolog n=1 Tax=Gentiana triflora RepID=Q84UT6_GENTR 2.0e-06
• FL-Next: tr=Perchloric acid soluble translation inhibitor protein homolog; Gentiana triflora (Clustered gentian). 0.0
C-terminus
sp_v3.0_unigene143657 SustainPine v3.0 261
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II 22 kDa protein, chloroplastic 2.167e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain