Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene127528 SustainPine v3.0 840
• AutoFact: Early light-inducible protein n=3 Tax=Populus trichocarpa RepID=A9PHM1_POPTR 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Early light-induced protein 1.961e-22
Complete
sp_v3.0_unigene127550 SustainPine v3.0 759
• AutoFact: Peroxiredoxin n=4 Tax=Papilionoideae RepID=B3GV28_PEA 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxiredoxin 1.511e-15
Putative Complete
sp_v3.0_unigene127579 SustainPine v3.0 996
• AutoFact: Thiazole biosynthetic enzyme n=9 Tax=Pinaceae RepID=Q3V7W7_PSEMZ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thiazole biosynthetic enzyme 5.372e-25
C-terminus
sp_v3.0_unigene127608 SustainPine v3.0 1007
• AutoFact: DUF659 domain containing protein 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene127756 SustainPine v3.0 594
• AutoFact: Triosephosphate isomerase n=2 Tax=Picea sitchensis RepID=A9NUV2_PICSI 0.0
• FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triosephosphate isomerase 0.0
Internal
sp_v3.0_unigene127841 SustainPine v3.0 827
• AutoFact: Triosephosphate isomerase n=1 Tax=Picea sitchensis RepID=A9NRN6_PICSI 0.0
• FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triosephosphate isomerase 0.0
C-terminus
sp_v3.0_unigene127850 SustainPine v3.0 829
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene127899 SustainPine v3.0 1392
• AutoFact: Annexin P35 n=1 Tax=Elaeis guineensis RepID=B3TLY9_ELAGV 0.0
• FL-Next: sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Annexin 2.595e-33
Complete
sp_v3.0_unigene127961 SustainPine v3.0 614
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene127991 SustainPine v3.0 1226
• AutoFact: Phosphoglycerate kinase n=1 Tax=Picea sitchensis RepID=B8LKQ1_PICSI 0.0
• FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Phosphoglycerate kinase 0.0
Putative C-terminus
sp_v3.0_unigene128006 SustainPine v3.0 762
• AutoFact: Thiazole biosynthetic enzyme n=9 Tax=Pinaceae RepID=Q3V7W7_PSEMZ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thiazole biosynthetic enzyme 3.627e-21
C-terminus
sp_v3.0_unigene128017 SustainPine v3.0 690
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Misassembled
sp_v3.0_unigene128041 SustainPine v3.0 945
• AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chlorophyll A/B binding protein, putative 5.65e-18
C-terminus
sp_v3.0_unigene128088 SustainPine v3.0 1093
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Putative N-terminus
sp_v3.0_unigene128117 SustainPine v3.0 665
• AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ELIP 5.956e-21
C-terminus
sp_v3.0_unigene128427 SustainPine v3.0 577
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 1.453e-07
Putative N-terminus
sp_v3.0_unigene128755 SustainPine v3.0 670
• AutoFact: pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase 8.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Quinone oxidoreductase-like protein 5.73e-07
Internal
sp_v3.0_unigene129041 SustainPine v3.0 532
• AutoFact: Ribulose-5-phosphate-3-epimerase n=2 Tax=Papilionoideae RepID=Q8S4X2_PEA 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose-phosphate 3-epimerase, chloroplastic 4.479e-13
C-terminus
sp_v3.0_unigene129050 SustainPine v3.0 585
• AutoFact: putative protein disulfide isomerase [Gossypium hirsutum] 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PDI 3.624e-18
C-terminus
sp_v3.0_unigene129427 SustainPine v3.0 238
• AutoFact: Phosphoglycerate kinase (Fragment) n=1 Tax=Picea mariana RepID=O65080_PICMA 3.0e-25
• FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Phosphoglycerate kinase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain