Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene126841 SustainPine v3.0 698
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene126851 SustainPine v3.0 977
AutoFact: nucleic acid binding protein1 [Zea mays] gb|AAA33486.1| nucleic acid-binding protein [Zea mays] gb|ACG38158.1| ribonucleoprotein [Zea mays] gb|ACL52389.1| unknown [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribonucleoprotein 3.69e-17
C-terminus
sp_v3.0_unigene126902 SustainPine v3.0 771
AutoFact: Thiazole biosynthetic enzyme n=9 Tax=Pinaceae RepID=Q3V7W7_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiazole biosynthetic enzyme 8.723e-14
Putative N-terminus
sp_v3.0_unigene126914 SustainPine v3.0 595
AutoFact: putative cyclic nucleotide and calmodulin-regulated ion channel protein [Hordeum vulgare subsp. vulgare] 2.0e-22
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 4.62e-06
C-terminus
sp_v3.0_unigene126926 SustainPine v3.0 2170
AutoFact: Heat shock cognate 70 kDa protein 4 n=12 Tax=Embryophyta RepID=HSP74_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 2.01787e-43
C-terminus
sp_v3.0_unigene126953 SustainPine v3.0 714
AutoFact: 2-oxo acid dehydrogenase, lipoyl-binding site [Medicago truncatula] 3.0e-37
FL-Next: tr=Glycine decarboxylase complex H-protein; Pinus pinaster (Maritime pine). 0.0
Sma3: Glycine cleavage system H protein, mitochondrial 1.173e-13
C-terminus
sp_v3.0_unigene126979 SustainPine v3.0 921
AutoFact: Thiazole biosynthetic enzyme n=9 Tax=Pinaceae RepID=Q3V7W7_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiazole biosynthetic enzyme 2.447e-17
N-terminus
sp_v3.0_unigene126996 SustainPine v3.0 495
AutoFact: DUF659 domain containing protein 6.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene127011 SustainPine v3.0 820
AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 4.278e-31
Complete
sp_v3.0_unigene127066 SustainPine v3.0 445
AutoFact: DUF659 domain containing protein 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene127156 SustainPine v3.0 1214
AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chlorophyll A/B binding protein, putative 5.512e-17
Complete
sp_v3.0_unigene127319 SustainPine v3.0 767
AutoFact: annexin [Gossypium hirsutum] 8.0e-32
FL-Next: sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Annexin 1.928e-22
C-terminus
sp_v3.0_unigene127327 SustainPine v3.0 1193
AutoFact: Fructose-bisphosphate aldolase n=3 Tax=Picea sitchensis RepID=A9NUH5_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Complete
sp_v3.0_unigene127383 SustainPine v3.0 2047
AutoFact: Protein disulfide-isomerase n=2 Tax=Ricinus communis RepID=PDI_RICCO 0.0
FL-Next: sp=Protein disulfide-isomerase; Ricinus communis (Castor bean). 0.0
Sma3: Protein disulfide isomerase 1.859e-20
Complete
sp_v3.0_unigene127389 SustainPine v3.0 986
AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete
sp_v3.0_unigene127397 SustainPine v3.0 1308
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Complete
sp_v3.0_unigene127445 SustainPine v3.0 1016
AutoFact: chlorophyll a/b-binding protein [Pinus thunbergii] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 7.591e-31
Misassembled
sp_v3.0_unigene127467 SustainPine v3.0 874
AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete
sp_v3.0_unigene127474 SustainPine v3.0 616
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene127517 SustainPine v3.0 996
AutoFact: Heat shock protein 70 n=3 Tax=Embryophyta RepID=C9WCK6_9MARC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 6.50623e-42
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain