Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene115973 SustainPine v3.0 387
• AutoFact: Phosphoglycerate kinase (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8PP49_POSPM 0.0
• FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Phosphoglycerate kinase 0.0
Internal
sp_v3.0_unigene118483 SustainPine v3.0 331
• AutoFact: 60KD_IMP domain containing protein 1.0e-08
• FL-Next: sp=ALBINO3-like protein 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene119095 SustainPine v3.0 509
• AutoFact: stress-related chlorophyll a/b binding protein 1 [Chlamydomonas reinhardtii] emb|CAA64632.1| LI818r-1 [Chlamydomonas reinhardtii] gb|EDP01074.1| stress-related chlorophyll a/b binding protein 1 [Chlamydomonas reinhardtii] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein fucoxanthin chlorophyll a/c protein 9.099e-13
C-terminus
sp_v3.0_unigene120281 SustainPine v3.0 320
• AutoFact: Chloroplast light-harvesting chlorophyll-a/b binding protein n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y3_9CHLO 5.0e-19
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 0.0
N-terminus
sp_v3.0_unigene120684 SustainPine v3.0 213
• AutoFact: Photosystem II CP43 chlorophyll apoprotein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KUZ9_ARALL 7.0e-30
• FL-Next: sp=Photosystem II CP43 chlorophyll apoprotein; Pinus heldreichii. Plastid; Chloroplast. 0.0
• Sma3: Photosystem II CP43 chlorophyll apoprotein 6.725e-30
Internal
sp_v3.0_unigene122053 SustainPine v3.0 272
• AutoFact: RecName: Full=Glutathione S-transferase APIC; AltName: Full=GST class-phi dbj|BAA06150.1| api2 [Nicotiana tabacum] prf||2106387B Al-induced protein 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 2.971e-08
N-terminus
sp_v3.0_unigene123236 SustainPine v3.0 412
• AutoFact: Heat shock cognate 70 kDa protein 2 n=13 Tax=Magnoliophyta RepID=HSP72_ARATH 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene123323 SustainPine v3.0 111
• AutoFact: PsaB n=3 Tax=environmental samples RepID=C7EDU6_9VIRU 9.0e-08
• FL-Next: sp=Photosystem I P700 chlorophyll a apoprotein A2; Pinus amamiana. Plastid; Chloroplast. 0.0
• Sma3: Photosystem I P700 chlorophyll A apoprotein 9.928e-20
Internal
sp_v3.0_unigene123941 SustainPine v3.0 734
• AutoFact: Beta-glucosidase 40 n=2 Tax=Arabidopsis RepID=BGL40_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase, putative 4.21001e-40
Internal
sp_v3.0_unigene124787 SustainPine v3.0 385
• AutoFact: Cytochrome c biogenesis protein CCS1, chloroplastic n=2 Tax=Arabidopsis RepID=CCS1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c biogenesis protein CCS1, chloroplastic 2.522e-09
Internal
sp_v3.0_unigene124987 SustainPine v3.0 392
• AutoFact: putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] dbj|BAD35887.1| putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] 4.0e-33
• FL-Next: sp=Putative cyclic nucleotide-gated ion channel 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cyclic nucleotide-gated ion channel, putative 2.536e-09
Internal
sp_v3.0_unigene125229 SustainPine v3.0 375
• AutoFact: putative cell division control protein [Arabidopsis thaliana] 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 homolog 2.473e-10
Internal
sp_v3.0_unigene125265 SustainPine v3.0 270
• AutoFact: Protein translocase subunit secA (Fragment) n=1 Tax=Jatropha curcas RepID=E6NU73_9ROSI 4.0e-32
• FL-Next: Isoform 2 of Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 0.0
• Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene125862 SustainPine v3.0 148
• AutoFact: putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] dbj|BAD35887.1| putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] 8.0e-15
• FL-Next: sp=Putative cyclic nucleotide-gated ion channel 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 3.825e-06
Internal
sp_v3.0_unigene126241 SustainPine v3.0 402
• AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
• FL-Next: Isoform 2 of Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 0.0
• Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene126688 SustainPine v3.0 791
• AutoFact: Nucleic acid-binding protein n=1 Tax=Zea mays RepID=Q41834_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribonucleoprotein 1.048e-16
C-terminus
sp_v3.0_unigene126726 SustainPine v3.0 1168
• AutoFact: Fructose-bisphosphate aldolase n=3 Tax=Picea sitchensis RepID=A9NUH5_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Putative Complete
sp_v3.0_unigene126755 SustainPine v3.0 540
• AutoFact: pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Quinone oxidoreductase-like protein 5.951e-07
N-terminus
sp_v3.0_unigene126772 SustainPine v3.0 571
• AutoFact: DUF659 domain containing protein 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene126835 SustainPine v3.0 661
• AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PSI-E 2.4e-27
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain