Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene107132 SustainPine v3.0 471
• AutoFact: DUF659 domain containing protein 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene107693 SustainPine v3.0 183
• AutoFact: Photosystem II CP43 chlorophyll apoprotein n=1 Tax=Ptilidium pulcherrimum RepID=F5GUZ9_9MARC 2.0e-28
• FL-Next: sp=Photosystem II CP43 chlorophyll apoprotein; Pinus arizonica. Plastid; Chloroplast. 0.0
• Sma3: Photosystem II CP43 chlorophyll apoprotein 1.088e-09
Internal
sp_v3.0_unigene107990 SustainPine v3.0 398
• AutoFact: Cyclic nucleotide gated channel n=1 Tax=Malus x domestica RepID=A9CRE4_MALDO 2.0e-37
• FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 4.901e-06
Internal
sp_v3.0_unigene108188 SustainPine v3.0 103
• AutoFact: photosystem I assembly protein Ycf4 [Pinus thunbergii] sp|P41620.1|YCF4_PINTH RecName: Full=Photosystem I assembly protein ycf4 dbj|BAA04362.1| ORF184 [Pinus thunbergii] gb|ACP50846.1| photosystem I assembly protein ycf4 [Pinus resinosa] gb|ACP51154.1| ph 2.0e-07
• FL-Next: tr=ORF56a; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Putative Complete
sp_v3.0_unigene108601 SustainPine v3.0 349
• AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 2.0e-36
• FL-Next: sp=Protein translocase subunit SECA1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene108624 SustainPine v3.0 255
• AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative n=1 Tax=Ricinus communis RepID=B9SYC0_RICCO 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protein ftsH, putative 2.805e-14
Internal
sp_v3.0_unigene109377 SustainPine v3.0 176
• AutoFact: Photosystem I assembly protein ycf3 n=1 Tax=Pinus thunbergii RepID=C3VYX2_PINTH 1.0e-12
• FL-Next: sp=Photosystem I assembly protein ycf3; Cathaya argyrophylla. Plastid; Chloroplast. 0.0
• Sma3: Photosystem I assembly protein ycf3 0.0
Putative N-terminus
sp_v3.0_unigene110467 SustainPine v3.0 647
• AutoFact: DUF659 domain containing protein 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene110605 SustainPine v3.0 136
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene110622 SustainPine v3.0 347
• AutoFact: PREDICTED: similar to transporter-related n=1 Tax=Vitis vinifera RepID=UPI0001984468 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Major facilitator superfamily 1.351e-10
Internal
sp_v3.0_unigene111024 SustainPine v3.0 264
• AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 2.0e-27
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 5.975e-40
Internal
sp_v3.0_unigene111093 SustainPine v3.0 335
• AutoFact: putative anion transporter 4 [Arabidopsis thaliana] sp|Q66GI9.1|ANTR4_ARATH RecName: Full=Probable anion transporter 4, chloroplastic; AltName: Full=Phosphate transporter PHT4;3; Flags: Precursor gb|AAU05536.1| At3g46980 [Arabidopsis thaliana] gb|AEE78226 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sialin, putative 8.192e-13
Internal
sp_v3.0_unigene111263 SustainPine v3.0 249
• AutoFact: Photosystem II CP47 chlorophyll apoprotein n=13 Tax=Chlorophyta RepID=PSBB_CHLVU 1.0e-38
• FL-Next: sp=Photosystem II CP47 chlorophyll apoprotein; Pinus amamiana. Plastid; Chloroplast. 0.0
• Sma3: Photosystem II CP47 chlorophyll apoprotein 6.265e-33
Internal
sp_v3.0_unigene112039 SustainPine v3.0 464
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene112378 SustainPine v3.0 485
• AutoFact: pfam00504, Chloroa_b-bind, Chlorophyll A-B binding protein 6.0e-16
• FL-Next: sp=Chlorophyll a-b binding protein L1818, chloroplastic; Chlamydomonas moewusii (Chlamydomonas eugametos). 0.0
Putative N-terminus
sp_v3.0_unigene113453 SustainPine v3.0 453
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene113636 SustainPine v3.0 538
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT dimerisation domain-containing protein-like 5.092e-07
Putative Complete
sp_v3.0_unigene113797 SustainPine v3.0 205
• AutoFact: Photosystem I iron-sulfur center n=281 Tax=Eukaryota RepID=PSAC_ARATH 2.0e-29
• FL-Next: sp=Photosystem I iron-sulfur center; Pinus amamiana. Plastid; Chloroplast. 0.0
• Sma3: PsaC 0.0
C-terminus
sp_v3.0_unigene114681 SustainPine v3.0 91
• AutoFact: Photosystem I P700 chlorophyll a apoprotein (Fragment) n=1 Tax=Compsopogon caeruleus RepID=Q6TNY9_9RHOD 7.0e-10
• FL-Next: sp=Photosystem I P700 chlorophyll a apoprotein A2; Pinus amamiana. Plastid; Chloroplast. 0.0
• Sma3: Photosystem I P700 chlorophyll a apoprotein A2 0.0
Internal
sp_v3.0_unigene114739 SustainPine v3.0 93
• AutoFact: Photosystem II CP47 chlorophyll apoprotein n=28 Tax=Pinaceae RepID=C1IXH2_PICSI 1.0e-07
• FL-Next: sp=Photosystem II CP47 chlorophyll apoprotein; Pseudotsuga menziesii var. menziesii. Plastid; Chloroplast. 0.0
• Sma3: Protein CP-47 1.573e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain