Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene97482 SustainPine v3.0 282
• AutoFact: Ftsh-like protease n=1 Tax=Pisum sativum RepID=Q6A167_PEA 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protein ftsH, putative 1.763e-14
Internal
sp_v3.0_unigene98370 SustainPine v3.0 375
• AutoFact: DUF659 domain containing protein 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene98491 SustainPine v3.0 528
• AutoFact: Unassigned protein
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene98601 SustainPine v3.0 531
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Transposase-like protein 3.426e-06
Internal
sp_v3.0_unigene98634 SustainPine v3.0 328
• AutoFact: 26S proteasome regulatory complex, ATPase RPT1 (ISS) [Ostreococcus tauri] emb|CAL57923.1| 26S proteasome regulatory complex, ATPase RPT1 (ISS) [Ostreococcus tauri] 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene99442 SustainPine v3.0 762
• AutoFact: [GEPR] COG0477 Permeases of the major facilitator superfamily 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sialin, putative 8.984e-13
C-terminus
sp_v3.0_unigene100617 SustainPine v3.0 184
• AutoFact: RecName: Full=Cytochrome c biogenesis protein CCS1, chloroplastic; AltName: Full=C-type cytochrome synthesis protein 1; Flags: Precursor gb|AAB95195.1| CCS1 [Chlamydomonas reinhardtii] gb|AAB95196.1| CCS1 [Chlamydomonas reinhardtii] gb|AAM23259.1| c-type 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c biogenesis protein CCS1, chloroplastic 2.194e-09
Internal
sp_v3.0_unigene101376 SustainPine v3.0 793
• AutoFact: Metal transporter n=1 Tax=Nicotiana tabacum RepID=C4TNX4_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ZIP transporter 1.829e-31
C-terminus
sp_v3.0_unigene101806 SustainPine v3.0 539
• AutoFact: Thylakoidal processing peptidase 1, chloroplastic n=2 Tax=Arabidopsis RepID=TPP1_ARATH 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidase/ serine-type peptidase 1.803e-08
C-terminus
sp_v3.0_unigene101904 SustainPine v3.0 523
• AutoFact: Chlorophyll A/B binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V1_RICCO 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.445e-38
Internal
sp_v3.0_unigene101987 SustainPine v3.0 713
• AutoFact: Heat shock 70 kDa protein n=3 Tax=rosids RepID=HSP70_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene102627 SustainPine v3.0 787
• AutoFact: Protein translocase subunit secA n=1 Tax=Ricinus communis RepID=B9RN40_RICCO 0.0
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Spinacia oleracea (Spinach). 0.0
• Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene102893 SustainPine v3.0 479
• AutoFact: Protein translocase subunit secA n=1 Tax=Ricinus communis RepID=B9RN40_RICCO 0.0
• FL-Next: sp=Protein translocase subunit SECA1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene103950 SustainPine v3.0 401
• AutoFact: DUF659 domain containing protein 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene104026 SustainPine v3.0 331
• AutoFact: cyclic nucleotide gated channel 19 [Arabidopsis thaliana] sp|Q9LDR2.1|CNG19_ARATH RecName: Full=Putative cyclic nucleotide-gated ion channel 19; AltName: Full=Cyclic nucleotide-binding transporter 2 gb|AAF73129.1|AF148542_1 cyclic nucleotide-binding trans 6.0e-17
• FL-Next: sp=Putative cyclic nucleotide-gated ion channel 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 8.694e-06
Internal
sp_v3.0_unigene104314 SustainPine v3.0 167
• AutoFact: Photosystem I assembly protein ycf4 n=37 Tax=Pinaceae RepID=YCF4_PINKO 3.0e-25
• FL-Next: sp=Photosystem I assembly protein Ycf4; Pinus arizonica. Plastid; Chloroplast. 0.0
• Sma3: Photosystem I assembly protein ycf4 0.0
Internal
sp_v3.0_unigene104635 SustainPine v3.0 415
• AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 2.038e-29
C-terminus
sp_v3.0_unigene105788 SustainPine v3.0 254
• AutoFact: Cytochrome b6 n=9 Tax=Viridiplantae RepID=CYB6_CHLVU 5.0e-24
• FL-Next: sp=Cytochrome b6; Podocarpus totara. Plastid; Chloroplast. 0.0
• Sma3: Cytochrome b6 0.0
Putative C-terminus
sp_v3.0_unigene106032 SustainPine v3.0 266
• AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 3.0e-32
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Pisum sativum (Garden pea). 0.0
• Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene106715 SustainPine v3.0 392
• AutoFact: DUF659 domain containing protein 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain