Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene80176 SustainPine v3.0 235
• AutoFact: Chloroplast light-harvesting complex I protein Lhca9 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ7_ACEAT 5.0e-17
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Internal
sp_v3.0_unigene80275 SustainPine v3.0 318
• AutoFact: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial n=2 Tax=Arabidopsis RepID=FTSHB_ARATH 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protein ftsH, putative 1.698e-14
Internal
sp_v3.0_unigene80396 SustainPine v3.0 105
• AutoFact: 9-cis epoxycarotenoid dioxygenase (Fragment) n=2 Tax=Oncidium Gower Ramsey RepID=Q52QS7_ONCHC 9.0e-10
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 1.854e-30
Internal
sp_v3.0_unigene80558 SustainPine v3.0 215
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.618e-21
Putative C-terminus
sp_v3.0_unigene80649 SustainPine v3.0 400
• AutoFact: Chlorophyll a-b binding protein, chloroplastic n=16 Tax=Physcomitrella patens RepID=CB2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 6.823e-21
Internal
sp_v3.0_unigene80694 SustainPine v3.0 193
• AutoFact: chlorophyll a/b-binding protein [Mesembryanthemum crystallinum] 1.0e-20
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.191e-18
Internal
sp_v3.0_unigene80822 SustainPine v3.0 195
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=B8LMQ9_PICSI 2.0e-07
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene80829 SustainPine v3.0 329
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast chlorophyll A-B binding protein 40 2.26e-08
Complete
sp_v3.0_unigene80965 SustainPine v3.0 220
• AutoFact: ATP synthase subunit beta (Fragment) n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NEG5_COPC7 1.0e-32
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta, mitochondrial 4.379e-10
Internal
sp_v3.0_unigene81681 SustainPine v3.0 408
• AutoFact: Chlorophyll a-b binding protein 4, chloroplastic n=2 Tax=core eudicotyledons RepID=CB24_SOLLC 3.0e-29
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 3.328e-14
Internal
sp_v3.0_unigene81685 SustainPine v3.0 425
• AutoFact: Superoxide dismutase [Cu-Zn] n=9 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=SODC_CRYGA 3.0e-31
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene81756 SustainPine v3.0 272
• AutoFact: ATP-dependent zinc metalloprotease FTSH 5, mitochondrial n=2 Tax=Oryza sativa RepID=FTSH5_ORYSJ 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protease ftsH homolog 2.463e-13
Internal
sp_v3.0_unigene93797 SustainPine v3.0 1287
• AutoFact: Peroxiredoxin, putative n=1 Tax=Ricinus communis RepID=B9SRG0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxiredoxin 1.585e-15
Complete
sp_v3.0_unigene94168 SustainPine v3.0 584
• AutoFact: cytochrome c biogenesis protein CCS1 [Arabidopsis thaliana] sp|Q9XIA4.1|CCS1_ARATH RecName: Full=Cytochrome c biogenesis protein CCS1, chloroplastic; AltName: Full=C-type cytochrome synthesis protein 1; Flags: Precursor gb|AAD43162.1|AC007504_17 Similar t 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c biogenesis protein CCS1, chloroplastic 6.859e-14
C-terminus
sp_v3.0_unigene94597 SustainPine v3.0 458
• AutoFact: Protein dimerization, putative n=1 Tax=Ricinus communis RepID=B9SWK8_RICCO 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene95232 SustainPine v3.0 357
• AutoFact: Heat shock protein 70 (Fragment) n=1 Tax=Picea glauca RepID=Q40846_PICGL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene95241 SustainPine v3.0 858
• AutoFact: DUF659 domain containing protein 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene96249 SustainPine v3.0 488
• AutoFact: Zinc transporter protein ZIP1 n=1 Tax=Glycine max RepID=Q941P4_SOYBN 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ZIP transporter 5.665e-29
C-terminus
sp_v3.0_unigene96256 SustainPine v3.0 269
• AutoFact: Unassigned protein
• FL-Next: tr=ORF40u; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Putative Complete
sp_v3.0_unigene97342 SustainPine v3.0 344
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain