Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene77406 SustainPine v3.0 160
• AutoFact: Chloroplast light-harvesting complex II protein Lhcbm3 n=1 Tax=Bigelowiella natans RepID=Q9LE97_BIGNA 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 5.957e-16
Internal
sp_v3.0_unigene77466 SustainPine v3.0 232
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II core complex proteins psbY 5.925e-14
C-terminus
sp_v3.0_unigene77528 SustainPine v3.0 370
• AutoFact: Heat shock protein 70 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q6L9F6_NICBE 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene77562 SustainPine v3.0 299
• AutoFact: Putative protein similar to phosphatidylinositol glycan [Oryza sativa Japonica Group] 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene77716 SustainPine v3.0 186
• AutoFact: Translationally-controlled tumor protein homolog n=4 Tax=Pinaceae RepID=TCTP_PSEMZ 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translationally-controlled tumor protein homolog 0.0
Putative C-terminus
sp_v3.0_unigene78016 SustainPine v3.0 286
• AutoFact: Chloroplast ribosomal protein S1 (Fragment) n=1 Tax=Cucumis sativus RepID=A1BQM4_CUCSA 6.0e-20
• FL-Next: sp=30S ribosomal protein S1, chloroplastic; Spinacia oleracea (Spinach). 0.0
• Sma3: 30S ribosomal protein S1, chloroplast, putative, expressed 4.688e-09
Internal
sp_v3.0_unigene78175 SustainPine v3.0 304
• AutoFact: transketolase [Coprinopsis cinerea okayama7#130] gb|EAU88185.1| transketolase [Coprinopsis cinerea okayama7#130] 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transketolase 2.599e-22
Internal
sp_v3.0_unigene78428 SustainPine v3.0 233
• AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NXP2_PICSI 4.0e-29
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene78905 SustainPine v3.0 196
• AutoFact: Type 1 light-harvesting chlorophyll a/b-binding polypeptide (Fragment) n=1 Tax=Pinus palustris RepID=Q40957_PINPA 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.881e-21
Putative C-terminus
sp_v3.0_unigene79067 SustainPine v3.0 414
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.917e-16
C-terminus
sp_v3.0_unigene79144 SustainPine v3.0 295
• AutoFact: heat shock protein [Coprinopsis cinerea okayama7#130] gb|EAU91259.1| heat shock protein [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene79159 SustainPine v3.0 402
• AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 9.0e-13
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 5.027e-36
Putative Complete
sp_v3.0_unigene79177 SustainPine v3.0 305
• AutoFact: Phosphoglycerate kinase n=2 Tax=Ustilaginaceae RepID=E6ZRH3_9BASI 1.0e-39
• FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Phosphoglycerate kinase 0.0
Putative C-terminus
sp_v3.0_unigene79383 SustainPine v3.0 376
• AutoFact: NAD-dependent epimerase/dehydratase n=1 Tax=Zea mays RepID=B6T962_MAIZE 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAD-dependent epimerase/dehydratase 3.707e-07
Putative C-terminus
sp_v3.0_unigene79399 SustainPine v3.0 346
• AutoFact: annexin p34 [Solanum tuberosum] gb|ABA40432.1| annexin p34-like protein [Solanum tuberosum] gb|ABB02651.1| annexin p34-like [Solanum tuberosum] 1.0e-13
• FL-Next: sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Annexin 3.233e-11
Internal
sp_v3.0_unigene79483 SustainPine v3.0 395
• AutoFact: inorganic diphosphatase [Coprinopsis cinerea okayama7#130] gb|EAU92823.1| inorganic diphosphatase [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Soluble inorganic pyrophosphatase 1, chloroplastic 2.643e-09
Putative C-terminus
sp_v3.0_unigene79738 SustainPine v3.0 352
• AutoFact: HSP70 family protein n=1 Tax=Naegleria gruberi RepID=D2V432_NAEGR 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene79824 SustainPine v3.0 150
• AutoFact: NAD dependent epimerase/dehydratase, putative 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene79827 SustainPine v3.0 261
• AutoFact: ATP synthase subunit beta, mitochondrial n=4 Tax=Nicotiana RepID=ATPBM_NICPL 3.0e-23
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta 8.458e-11
Internal
sp_v3.0_unigene79943 SustainPine v3.0 135
• AutoFact: Major light-harvesting chlorophyll a/b protein 3 n=1 Tax=Dunaliella salina RepID=A8BDJ0_DUNSA 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chlorophyll a-b binding protein of LHCII type I, chloroplastic 4.078e-15
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain