Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene74963 SustainPine v3.0 364
• AutoFact: NAD(P)-binding Rossmann-fold-containing protein [Arabidopsis thaliana] sp|Q9FVR6.1|Y1222_ARATH RecName: Full=Uncharacterized protein At1g32220, chloroplastic; Flags: Precursor gb|AAG23446.1|AC084165_12 unknown protein [Arabidopsis thaliana] gb|AAM64920.1| 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75018 SustainPine v3.0 231
• AutoFact: Type I chlorophyll a/b-binding protein b (Fragment) n=10 Tax=core eudicotyledons RepID=Q9AVF0_AMATR 1.0e-32
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 1.573e-21
Internal
sp_v3.0_unigene75065 SustainPine v3.0 301
• AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 3.0e-31
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 1.837e-35
Internal
sp_v3.0_unigene75206 SustainPine v3.0 386
• AutoFact: Superoxide dismutase [Cu-Zn] n=2 Tax=Pleosporineae RepID=E4ZWR5_LEPMC 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene75567 SustainPine v3.0 181
• AutoFact: Ribulose-phosphate 3-epimerase, chloroplastic n=7 Tax=Poaceae RepID=RPE_ORYSJ 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose-phosphate 3-epimerase 9.315e-12
Internal
sp_v3.0_unigene75633 SustainPine v3.0 216
• AutoFact: Thioredoxin-dependent peroxide reductase n=2 Tax=Ixodes scapularis RepID=B7QN17_IXOSC 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 4.709e-16
Internal
sp_v3.0_unigene75634 SustainPine v3.0 224
• AutoFact: Plastid/chloroplast ribosomal protein L13 n=1 Tax=Volvox carteri f. nagariensis RepID=D8THU4_VOLCA 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CL13 4.296e-09
Internal
sp_v3.0_unigene75661 SustainPine v3.0 377
• AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 9.0e-15
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene75695 SustainPine v3.0 284
• AutoFact: thioredoxin m [Chlamydomonas reinhardtii] sp|P23400.3|TRXM_CHLRE RecName: Full=Thioredoxin M-type, chloroplastic; Short=Trx-M; AltName: Full=Thioredoxin-CH2; Flags: Precursor emb|CAA56851.1| thioredoxin m [Chlamydomonas reinhardtii] gb|EDP10052.1| thiored 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin m 1.097e-27
Putative C-terminus
sp_v3.0_unigene75781 SustainPine v3.0 461
• AutoFact: ATP synthase subunit beta n=2 Tax=Pucciniales RepID=E3K357_PUCGT 0.0
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta 3.886e-13
Internal
sp_v3.0_unigene75866 SustainPine v3.0 528
• AutoFact: Heat shock protein 70 n=1 Tax=Hypsizygus marmoreus RepID=C7E3U3_HYPMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 1.148e-38
Internal
sp_v3.0_unigene76014 SustainPine v3.0 311
• AutoFact: Zinc transporter protein ZIP1 n=1 Tax=Glycine max RepID=Q941P4_SOYBN 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ZIP transporter 1.182e-29
C-terminus
sp_v3.0_unigene76024 SustainPine v3.0 303
• AutoFact: Translationally-controlled tumor protein homolog n=4 Tax=Pinaceae RepID=TCTP_PSEMZ 3.0e-14
• FL-Next: sp=Translationally-controlled tumor protein homolog; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Translationally-controlled tumor protein homolog 0.0
C-terminus
sp_v3.0_unigene76279 SustainPine v3.0 310
• AutoFact: ALBINO3-like protein 2, chloroplastic n=2 Tax=Arabidopsis RepID=ALB32_ARATH 1.0e-16
• FL-Next: sp=ALBINO3-like protein 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene76295 SustainPine v3.0 154
• AutoFact: Light-harvesting chlorphyll binding protein 3 (Fragment) n=1 Tax=Solenostemon scutellarioides RepID=C9VWR2_SOLSC 3.0e-16
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.249e-13
Putative C-terminus
sp_v3.0_unigene76331 SustainPine v3.0 366
• AutoFact: Beta-glucosidase 24 n=2 Tax=Oryza sativa RepID=BGL24_ORYSJ 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase, putative 1.376e-34
Internal
sp_v3.0_unigene77049 SustainPine v3.0 309
• AutoFact: Beta-primeverosidase n=3 Tax=Camellia sinensis RepID=Q7X9A9_CAMSI 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase, putative 3.067e-25
Internal
sp_v3.0_unigene77095 SustainPine v3.0 127
• AutoFact: Fructose-bisphosphate aldolase, class I (IC) n=1 Tax=Ostreococcus tauri RepID=Q01GD0_OSTTA 1.0e-11
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Internal
sp_v3.0_unigene77287 SustainPine v3.0 216
• AutoFact: ATP synthase subunit beta n=2 Tax=Agaricales RepID=B0CSN1_LACBS 4.0e-32
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta 1.734e-20
Internal
sp_v3.0_unigene77399 SustainPine v3.0 393
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.078e-21
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain