Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene67961 SustainPine v3.0 255
• AutoFact: Ribulose-phosphate 3-epimerase n=1 Tax=Ricinus communis RepID=B9RLW1_RICCO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentose-5-phosphate 3-epimerase 2.497e-16
C-terminus
sp_v3.0_unigene68109 SustainPine v3.0 377
• AutoFact: 60 kDa chaperonin beta subunit n=4 Tax=Poaceae RepID=Q6ZFJ9_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: groEL protein 2.46629e-43
Internal
sp_v3.0_unigene68243 SustainPine v3.0 363
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 2.94273e-44
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene68361 SustainPine v3.0 281
• AutoFact: Ribulose bisphosphate carboxylase small chain n=3 Tax=Triticeae RepID=Q9FRZ3_WHEAT 8.0e-40
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene68443 SustainPine v3.0 401
• AutoFact: Beta-glucosidase D7 (Fragment) n=1 Tax=Lotus japonicus RepID=B2ZUU2_LOTJA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase, putative 0.0
Putative N-terminus
sp_v3.0_unigene68794 SustainPine v3.0 255
• AutoFact: MRNA-binding protein (Fragment) n=1 Tax=Capsicum annuum RepID=A0MLW6_CAPAN 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene68904 SustainPine v3.0 358
• AutoFact: LZ_Tnp_IS66 domain containing protein 0.0001
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 16kDa membrane protein 6.299e-10
Putative C-terminus
sp_v3.0_unigene69301 SustainPine v3.0 265
• AutoFact: Putative NAD-dependent formate dehydrogenase (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX85_PINPS 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Formate dehydrogenase 2.159e-23
C-terminus
sp_v3.0_unigene69860 SustainPine v3.0 436
• AutoFact: pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase 8.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene70808 SustainPine v3.0 380
• AutoFact: Phosphoglycerate kinase, chloroplastic n=13 Tax=Triticeae RepID=PGKH_WHEAT 0.0
• FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Phosphoglycerate kinase 0.0
C-terminus
sp_v3.0_unigene71213 SustainPine v3.0 343
• AutoFact: Chlorophyll a-b binding protein of LHCII type III, chloroplastic n=11 Tax=Magnoliophyta RepID=CB23_HORVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.749e-18
Putative C-terminus
sp_v3.0_unigene71233 SustainPine v3.0 306
• AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 1.0e-33
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 9.3887e-44
Internal
sp_v3.0_unigene71907 SustainPine v3.0 376
• AutoFact: Chlorophyll a-b binding protein 3C, chloroplastic n=40 Tax=Magnoliophyta RepID=CB2G_SOLLC 0.0
• FL-Next: tr=Light-harvesting chlorophyll a/b-binding protein of photosystem II; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: LHCP 2.645e-19
Internal
sp_v3.0_unigene71937 SustainPine v3.0 416
• AutoFact: Putative chloroplast chlorophyll A-B binding protein type II (Fragment) n=2 Tax=Andropogoneae RepID=Q0H633_SORBI 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.917e-16
C-terminus
sp_v3.0_unigene71945 SustainPine v3.0 353
• AutoFact: chloroplast chlorophyll a/b-binding protein [Agave tequilana] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 8.372e-24
C-terminus
sp_v3.0_unigene72096 SustainPine v3.0 233
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 7.0e-28
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus
sp_v3.0_unigene72509 SustainPine v3.0 241
• AutoFact: Os10g0170300 protein n=3 Tax=Oryza sativa RepID=Q33AP3_ORYSJ 7.0e-18
• FL-Next: tr=Putative uncharacterized protein OSJNBa0071I20.7; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene73101 SustainPine v3.0 301
• AutoFact: Metal transport protein n=2 Tax=Medicago truncatula RepID=Q6VM19_MEDTR 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ZIP transporter 1.021e-28
Putative C-terminus
sp_v3.0_unigene73148 SustainPine v3.0 304
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pooideae RepID=C3VQ50_WHEAT 2.0e-25
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
C-terminus
sp_v3.0_unigene73477 SustainPine v3.0 439
• AutoFact: Chlorophyll a-b binding protein type 2 member 2 (Fragment) n=5 Tax=Coniferales RepID=CB22_PINSY 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 3.607e-29
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain