Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene64361 SustainPine v3.0 287
• AutoFact: Triosephosphate isomerase n=2 Tax=Picea sitchensis RepID=A9NUV2_PICSI 3.0e-23
• FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triosephosphate isomerase 0.0
Internal
sp_v3.0_unigene64375 SustainPine v3.0 275
• AutoFact: Nucleoside diphosphate kinase (Fragment) n=2 Tax=Glycine max RepID=C6T1V4_SOYBN 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
Putative C-terminus
sp_v3.0_unigene64551 SustainPine v3.0 291
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene64774 SustainPine v3.0 307
• AutoFact: annexin-like protein [Brassica juncea] gb|ABB59550.1| annexin-like protein [Brassica juncea] gb|AAR10457.2| annexin [Brassica juncea] gb|ABD74418.1| annexin 1 [Brassica juncea] 4.0e-18
• FL-Next: sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Annexin 1.467e-19
Internal
sp_v3.0_unigene65049 SustainPine v3.0 159
• AutoFact: thiazole biosynthetic enzyme [Pseudotsuga menziesii var. menziesii] 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thiazole biosynthetic enzyme, chloroplastic 5.294e-13
Internal
sp_v3.0_unigene65060 SustainPine v3.0 200
• AutoFact: putative protein disulfide isomerase [Gossypium hirsutum] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein disulfide isomerase 2.134e-19
Internal
sp_v3.0_unigene65064 SustainPine v3.0 194
• AutoFact: ATP synthase subunit beta n=1 Tax=Bursaphelenchus xylophilus RepID=D1MBQ0_BURXY 1.0e-20
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta 9.966e-14
Internal
sp_v3.0_unigene65108 SustainPine v3.0 169
• AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 4.0e-16
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus
sp_v3.0_unigene65380 SustainPine v3.0 270
• AutoFact: Beta-glucosidase, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9REG8_RICCO 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase, putative 0.0
Internal
sp_v3.0_unigene65564 SustainPine v3.0 121
• AutoFact: Chlorophyll a-b binding protein 4, chloroplastic n=3 Tax=Brassicaceae RepID=CA4_ARATH 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chlorophyll a/b-binding protein 1.876e-11
Putative C-terminus
sp_v3.0_unigene65571 SustainPine v3.0 231
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 1.0e-31
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.175e-33
Internal
sp_v3.0_unigene65636 SustainPine v3.0 170
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=2 Tax=Lactuca sativa RepID=RBS_LACSA 5.0e-15
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus
sp_v3.0_unigene65650 SustainPine v3.0 234
• AutoFact: Nucleoside diphosphate kinase n=1 Tax=Pinus pinaster RepID=Q8RVI6_PINPS 3.0e-27
• FL-Next: sp=Nucleoside diphosphate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Nucleoside diphosphate kinase 4.439e-25
Putative C-terminus
sp_v3.0_unigene65671 SustainPine v3.0 280
• AutoFact: putative rubisco subunit binding-protein alpha subunit precursor (60 kDa chaperonin alpha subunit) [Oryza sativa Japonica Group] gb|ABG00011.1| RuBisCO subunit binding-protein alpha subunit, chloroplast precursor, putative, expressed [Oryza sativa Japonic 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CPN-60 alpha 1.361e-22
Internal
sp_v3.0_unigene65738 SustainPine v3.0 174
• AutoFact: Light-harvesting complex II protein Lhcb1 n=2 Tax=Magnoliophyta RepID=B9I107_POPTR 2.0e-12
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 1.102e-16
Internal
sp_v3.0_unigene65949 SustainPine v3.0 112
• AutoFact: Chlorophyll a-b binding protein 3C, chloroplastic n=40 Tax=Magnoliophyta RepID=CB2G_SOLLC 8.0e-07
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Internal
sp_v3.0_unigene66515 SustainPine v3.0 305
• AutoFact: Thioredoxin (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9ST39_PHYPA 1.0e-13
• FL-Next: sp=Thioredoxin-like protein CITRX, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Putative thioredoxin 3.859e-07
Putative C-terminus
sp_v3.0_unigene66621 SustainPine v3.0 343
• AutoFact: Transketolase n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBU3_MACCJ 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transketolase 6.664e-25
Internal
sp_v3.0_unigene67621 SustainPine v3.0 406
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene67803 SustainPine v3.0 327
• AutoFact: zinc transporter ZIP6 [Arabidopsis halleri subsp. halleri] 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ZIP transporter 8.988e-27
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain