Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene61142 SustainPine v3.0 232
• AutoFact: Triosephosphate isomerase n=2 Tax=Picea sitchensis RepID=A9NUV2_PICSI 2.0e-32
• FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triosephosphate isomerase 0.0
Internal
sp_v3.0_unigene61219 SustainPine v3.0 376
• AutoFact: Os08g0382400 protein n=3 Tax=Oryza sativa RepID=Q6YW78_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase chloroplast 4.107e-09
Internal
sp_v3.0_unigene61240 SustainPine v3.0 317
• AutoFact: DUF659 domain containing protein 3.0e-32
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene61330 SustainPine v3.0 289
• AutoFact: [GEPR] COG0477 Permeases of the major facilitator superfamily 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61638 SustainPine v3.0 339
• AutoFact: protein kinase family protein [Arabidopsis thaliana] sp|Q9LZV4.1|STN8_ARATH RecName: Full=Serine/threonine-protein kinase STN8, chloroplastic; AltName: Full=Protein STATE TRANSITION 8; Flags: Precursor emb|CAB82762.1| putative protein [Arabidopsis thalian 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61847 SustainPine v3.0 345
• AutoFact: Violaxanthin de-epoxidase n=1 Tax=Camellia sinensis RepID=Q8S4C2_CAMSI 1.0e-29
• FL-Next: sp=Violaxanthin de-epoxidase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Violaxanthin de-epoxidase 3.497e-34
Internal
sp_v3.0_unigene62080 SustainPine v3.0 279
• AutoFact: NAD dependent epimerase/dehydratase, putative 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene62368 SustainPine v3.0 233
• AutoFact: ATP synthase subunit beta n=1 Tax=Nicotiana sylvestris RepID=Q9ZR78_NICSY 3.0e-23
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta 6.714e-10
Internal
sp_v3.0_unigene62647 SustainPine v3.0 142
• AutoFact: 60 kDa inner membrane protein (Fragment) n=2 Tax=Populus trichocarpa RepID=B9HTF4_POPTR 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60 kDa inner membrane protein 4.703e-10
Internal
sp_v3.0_unigene62832 SustainPine v3.0 183
• AutoFact: DUF659 domain containing protein 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63004 SustainPine v3.0 213
• AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=C0PPY1_PICSI 2.0e-17
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene63077 SustainPine v3.0 237
• AutoFact: DUF659 domain containing protein 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63443 SustainPine v3.0 96
• AutoFact: Photosystem I P700 chlorophyll a apoprotein (Fragment) n=1 Tax=Physcomitrella patens RepID=Q9TNL4_9BRYO 3.0e-10
• FL-Next: tr=ORF40p; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
• Sma3: P700 chlorophyll a-apoprotein A2 0.0
Putative Complete
sp_v3.0_unigene63747 SustainPine v3.0 264
• AutoFact: Protein translocase subunit secA (Fragment) n=1 Tax=Jatropha curcas RepID=E6NU73_9ROSI 1.0e-33
• FL-Next: Isoform 2 of Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 0.0
• Sma3: Protein translocase subunit secA 4.846e-31
Internal
sp_v3.0_unigene63871 SustainPine v3.0 172
• AutoFact: Na+/Pi transporter [Eutrema halophilum] 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63890 SustainPine v3.0 212
• AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 8.0e-22
• FL-Next: tr=Chlorophyll a/b-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: LHCP 3.801e-25
Internal
sp_v3.0_unigene63993 SustainPine v3.0 241
• AutoFact: Putative protein similar to phosphatidylinositol glycan [Oryza sativa Japonica Group] 1.0e-18
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene64204 SustainPine v3.0 218
• AutoFact: Protein translocase subunit secA n=1 Tax=Populus trichocarpa RepID=B9I9A8_POPTR 4.0e-31
• FL-Next: sp=Protein translocase subunit SECA1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene64265 SustainPine v3.0 132
• AutoFact: ORF64c n=1 Tax=Pinus koraiensis RepID=Q85WW9_PINKO 6.0e-17
• FL-Next: tr=ORF64c; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
• Sma3: Photosystem I P700 chlorophyll a apoprotein A2 0.0
C-terminus
sp_v3.0_unigene64309 SustainPine v3.0 254
• AutoFact: molecular chaperone DnaK [Parvularcula bermudensis HTCC2503] gb|ADM08907.1| molecular chaperone DnaK [Parvularcula bermudensis HTCC2503] 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain