Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene53196 SustainPine v3.0 135
• AutoFact: Photosystem I P700 chlorophyll a apoprotein n=146 Tax=Viridiplantae RepID=A9NP00_PICSI 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem I P700 chlorophyll a apoprotein A2 0.0
Internal
sp_v3.0_unigene53311 SustainPine v3.0 84
• AutoFact: F1 sector of membrane-bound ATP synthase, alpha subunit n=1 Tax=mine drainage metagenome RepID=E6QHR6_9ZZZZ 1.0e-06
• FL-Next: sp=ATP synthase subunit alpha, chloroplastic; Pinus taeda (Loblolly pine). Plastid; Chloroplast. 0.0
• Sma3: ATP synthase subunit alpha, chloroplastic 0.0
Internal
sp_v3.0_unigene53406 SustainPine v3.0 348
• AutoFact: Translationally-controlled tumor protein homolog n=4 Tax=Pinaceae RepID=TCTP_PSEMZ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translationally-controlled tumor protein homolog 0.0
N-terminus
sp_v3.0_unigene53483 SustainPine v3.0 414
• AutoFact: light-harvesting chlorophyll-a/b binding protein LhcbM2a [Chlamydomonas incerta] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 0.0
Putative Complete
sp_v3.0_unigene53519 SustainPine v3.0 456
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 6.075e-29
Internal
sp_v3.0_unigene53724 SustainPine v3.0 396
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 4.0e-27
• FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1B, chloroplastic; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 2.564e-25
Internal
sp_v3.0_unigene53957 SustainPine v3.0 370
• AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem I reaction center subunit IV A 2.042e-12
N-terminus
sp_v3.0_unigene54084 SustainPine v3.0 165
• AutoFact: DUF659 domain containing protein 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene54158 SustainPine v3.0 392
• AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.444e-14
N-terminus
sp_v3.0_unigene54181 SustainPine v3.0 393
• AutoFact: RecName: Full=Luminal-binding protein 5; Short=BiP 5; AltName: Full=78 kDa glucose-regulated protein homolog 5; Short=GRP-78-5; Flags: Precursor emb|CAA42660.1| luminal binding protein (BiP) [Nicotiana tabacum] 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene54210 SustainPine v3.0 442
• AutoFact: PsaO n=2 Tax=Wolffia arrhiza RepID=D1MI92_WOLAR 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 16kDa membrane protein 6.299e-10
Putative N-terminus
sp_v3.0_unigene54318 SustainPine v3.0 195
• AutoFact: Cytochrome b6 n=1 Tax=Trichodesmium erythraeum IMS101 RepID=CYB6_TRIEI 1.0e-10
• FL-Next: sp=Cytochrome b6; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
• Sma3: Cytochrome b6 0.0
Internal
sp_v3.0_unigene54346 SustainPine v3.0 451
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 7.882e-20
Putative Complete
sp_v3.0_unigene54424 SustainPine v3.0 180
• AutoFact: ATP synthase subunit beta n=1 Tax=Nicotiana sylvestris RepID=Q9ZR78_NICSY 7.0e-21
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta 1.043e-10
Internal
sp_v3.0_unigene54795 SustainPine v3.0 378
• AutoFact: protein kinase family protein [Arabidopsis thaliana] sp|Q9LZV4.1|STN8_ARATH RecName: Full=Serine/threonine-protein kinase STN8, chloroplastic; AltName: Full=Protein STATE TRANSITION 8; Flags: Precursor emb|CAB82762.1| putative protein [Arabidopsis thalian 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene54885 SustainPine v3.0 334
• AutoFact: DUF659 domain containing protein 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene54909 SustainPine v3.0 379
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.01e-16
C-terminus
sp_v3.0_unigene54959 SustainPine v3.0 130
• AutoFact: ATP synthase subunit alpha, chloroplastic n=23 Tax=Embryophyta RepID=ATPA_ANGEV 5.0e-14
• FL-Next: sp=ATP synthase subunit alpha, chloroplastic; Taiwania cryptomerioides. Plastid; Chloroplast. 0.0
• Sma3: F-ATPase subunit alpha 0.0
Internal
sp_v3.0_unigene55028 SustainPine v3.0 497
• AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.883e-29
C-terminus
sp_v3.0_unigene55034 SustainPine v3.0 445
• AutoFact: Plastocyanin, chloroplastic n=1 Tax=Scenedesmus obliquus RepID=PLAS_SCEOB 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastocyanin, chloroplastic 2.723e-28
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain