Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: LHCP

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene55028 SustainPine v3.0 497
• AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.883e-29
C-terminus
sp_v3.0_unigene56052 SustainPine v3.0 487
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.533e-16
C-terminus
sp_v3.0_unigene56905 SustainPine v3.0 415
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 6.372e-29
Internal
sp_v3.0_unigene56980 SustainPine v3.0 432
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.13e-16
N-terminus
sp_v3.0_unigene57060 SustainPine v3.0 411
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.356e-18
Putative Complete
sp_v3.0_unigene57073 SustainPine v3.0 296
• AutoFact: Chlorophyll a-b binding protein of LHCII n=2 Tax=Chlamydomonas RepID=Q9ZSJ4_CHLRE 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.457e-23
Putative C-terminus
sp_v3.0_unigene58781 SustainPine v3.0 256
• AutoFact: putative chlorophyll a/b binding protein [Triticum turgidum subsp. durum] 9.0e-35
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.837e-21
Internal
sp_v3.0_unigene63890 SustainPine v3.0 212
• AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 8.0e-22
• FL-Next: tr=Chlorophyll a/b-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: LHCP 3.801e-25
Internal
sp_v3.0_unigene65571 SustainPine v3.0 231
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 1.0e-31
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.175e-33
Internal
sp_v3.0_unigene65738 SustainPine v3.0 174
• AutoFact: Light-harvesting complex II protein Lhcb1 n=2 Tax=Magnoliophyta RepID=B9I107_POPTR 2.0e-12
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 1.102e-16
Internal
sp_v3.0_unigene71213 SustainPine v3.0 343
• AutoFact: Chlorophyll a-b binding protein of LHCII type III, chloroplastic n=11 Tax=Magnoliophyta RepID=CB23_HORVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.749e-18
Putative C-terminus
sp_v3.0_unigene71907 SustainPine v3.0 376
• AutoFact: Chlorophyll a-b binding protein 3C, chloroplastic n=40 Tax=Magnoliophyta RepID=CB2G_SOLLC 0.0
• FL-Next: tr=Light-harvesting chlorophyll a/b-binding protein of photosystem II; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: LHCP 2.645e-19
Internal
sp_v3.0_unigene71937 SustainPine v3.0 416
• AutoFact: Putative chloroplast chlorophyll A-B binding protein type II (Fragment) n=2 Tax=Andropogoneae RepID=Q0H633_SORBI 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.917e-16
C-terminus
sp_v3.0_unigene71945 SustainPine v3.0 353
• AutoFact: chloroplast chlorophyll a/b-binding protein [Agave tequilana] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 8.372e-24
C-terminus
sp_v3.0_unigene73477 SustainPine v3.0 439
• AutoFact: Chlorophyll a-b binding protein type 2 member 2 (Fragment) n=5 Tax=Coniferales RepID=CB22_PINSY 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 3.607e-29
C-terminus
sp_v3.0_unigene73700 SustainPine v3.0 397
• AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.242e-29
C-terminus
sp_v3.0_unigene73878 SustainPine v3.0 404
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 2.0e-39
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 7.457e-27
Putative C-terminus
sp_v3.0_unigene73942 SustainPine v3.0 438
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 4.655e-24
Putative Complete
sp_v3.0_unigene74194 SustainPine v3.0 289
• AutoFact: chloroplast chlorophyll a/b binding protein [Pachysandra terminalis] 1.0e-38
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.736e-21
Internal
sp_v3.0_unigene74263 SustainPine v3.0 471
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 9.99995e-41
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 1.743e-16
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain