Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr8 scaffold_23, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene432 SustainPine v3.0 2492
AutoFact: LMBR1-like membrane protein [Arabidopsis thaliana] sp|Q9M028.1|LMBD2_ARATH RecName: Full=LIMR family protein At5g01460 emb|CAB81929.1| putative protein [Arabidopsis thaliana] gb|AAL60018.1| unknown protein [Arabidopsis thaliana] gb|AAM20080.1| unknown pro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_23, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene4114 SustainPine v3.0 2096
AutoFact: inositol phosphorylceramide synthase 1 [Arabidopsis thaliana] emb|CAB88364.1| putative protein [Arabidopsis thaliana] gb|AAM98108.1| At3g54020/F5K20_320 [Arabidopsis thaliana] gb|AEE79176.1| inositol phosphorylceramide synthase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Chromosome chr8 scaffold_23, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene4653 SustainPine v3.0 361
AutoFact: DUF914 multi-domain protein 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr8 scaffold_23, whole genome shotgun sequence 8.766e-08
C-terminus
sp_v3.0_unigene17291 SustainPine v3.0 2519
AutoFact: Heat shock protein 70 n=3 Tax=Embryophyta RepID=C9WCK6_9MARC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_23, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene21949 SustainPine v3.0 655
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_23, whole genome shotgun sequence 6.054e-06
Internal
sp_v3.0_unigene63897 SustainPine v3.0 179
AutoFact: Selenium-binding protein-like n=2 Tax=Zea mays RepID=B6SPJ2_MAIZE 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_23, whole genome shotgun sequence 2.096e-08
Internal
sp_v3.0_unigene64875 SustainPine v3.0 276
AutoFact: Short-chain dehydrogenase/reductase 2 n=1 Tax=Lactuca sativa RepID=Q2PHF5_LACSA 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_23, whole genome shotgun sequence 2.503e-13
C-terminus
sp_v3.0_unigene126927 SustainPine v3.0 2243
AutoFact: Heat shock cognate 70 kDa protein n=7 Tax=Magnoliophyta RepID=HSP7C_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_23, whole genome shotgun sequence 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain