Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: extrinsic to membrane

Term: GO:0019898  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene151624 SustainPine v3.0 382
• AutoFact: 33kDa oxygen evolving protein of photosystem II (Fragment) n=1 Tax=Nephroselmis olivacea RepID=A9CM98_NEPOL 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 3.48899e-40
C-terminus
sp_v3.0_unigene153014 SustainPine v3.0 439
• AutoFact: Oxygen-evolving enhancer protein 2, chloroplastic n=2 Tax=Chlamydomonas reinhardtii RepID=PSBP_CHLRE 8.0e-24
• FL-Next: tr=Oxygen-evolving enhancer protein 2; Sequoia sempervirens (California redwood) (Taxodium sempervirens). 0.0
• Sma3: OEE2 1.79226e-42
C-terminus
sp_v3.0_unigene157663 SustainPine v3.0 359
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.433e-30
Internal
sp_v3.0_unigene159940 SustainPine v3.0 491
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.521e-36
N-terminus
sp_v3.0_unigene160483 SustainPine v3.0 408
• AutoFact: NV19190; similar to pol polyprotein 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.213e-07
N-terminus
sp_v3.0_unigene161196 SustainPine v3.0 521
• AutoFact: RVT_2 domain containing protein 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 1.828e-09
N-terminus
sp_v3.0_unigene161563 SustainPine v3.0 387
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.807e-19
Internal
sp_v3.0_unigene161597 SustainPine v3.0 424
• AutoFact: putative gag-pol polyprotein [Oryza sativa Japonica Group] gb|ABF96256.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 8.591e-07
Internal
sp_v3.0_unigene162258 SustainPine v3.0 454
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene164475 SustainPine v3.0 175
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.79e-10
Internal
sp_v3.0_unigene166387 SustainPine v3.0 451
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZU8_ORYSJ 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyprotein, putative 1.953e-06
N-terminus
sp_v3.0_unigene183841 SustainPine v3.0 449
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene187297 SustainPine v3.0 429
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene194247 SustainPine v3.0 183
• AutoFact: Oxygen evolving complex protein-like n=3 Tax=Oryza sativa RepID=Q6ZDL1_ORYSJ 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa protein 2.258e-09
Internal
sp_v3.0_unigene204903 SustainPine v3.0 204
• AutoFact: Oxygen-evolving enhancer protein 3-2, chloroplastic n=2 Tax=Arabidopsis RepID=PSBQ2_ARATH 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene205190 SustainPine v3.0 584
• AutoFact: GK15001 gene product from transcript GK15001-RA 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 1.812e-11
Internal
sp_v3.0_unigene205903 SustainPine v3.0 258
• AutoFact: Unassigned protein 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene206141 SustainPine v3.0 619
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.682e-08
Internal
sp_v3.0_unigene206468 SustainPine v3.0 253
• AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 8.25701e-41
C-terminus
sp_v3.0_unigene210153 SustainPine v3.0 237
• AutoFact: Oxygen-evolving enhancer protein 2, chloroplastic n=3 Tax=Papilionoideae RepID=PSBP_PEA 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE2 1.505e-35
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain