Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cell wall

Term: GO:0005618  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene18118 SustainPine v3.0 1897
• AutoFact: Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LMR7_PICSI 0.0
• FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Malic enzyme 0.0
C-terminus
sp_v3.0_unigene18123 SustainPine v3.0 1390
• AutoFact: Cysteine proteinase C1A n=1 Tax=Dactylis glomerata RepID=D0VEB8_DACGL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 0.0
Complete
sp_v3.0_unigene18131 SustainPine v3.0 1193
• AutoFact: Drf_FH1 multi-domain protein 3.0e-19
• Sma3: Extensin 5.115e-18
coding
sp_v3.0_unigene18133 SustainPine v3.0 2070
• AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene18134 SustainPine v3.0 1081
• AutoFact: ATP synthase subunit gamma, mitochondrial n=5 Tax=Arabidopsis RepID=ATPG3_ARATH 0.0
• FL-Next: sp=ATP synthase gamma chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase gamma chain 6.86636e-44
N-terminus
sp_v3.0_unigene18161 SustainPine v3.0 1893
• AutoFact: anthranilate phosphoribosyltransferase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Synaptotagmin, putative 3.733e-24
C-terminus
sp_v3.0_unigene18167 SustainPine v3.0 2203
• AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 2, putative n=1 Tax=Ricinus communis RepID=B9SCJ0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative xyloglucan endo-transglycosylase 1.975e-07
Complete
sp_v3.0_unigene18285 SustainPine v3.0 754
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 2.94273e-44
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene18291 SustainPine v3.0 1886
• AutoFact: Purple acid phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RHA3_RICCO 0.0
• FL-Next: sp=Purple acid phosphatase 2; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
• Sma3: Purple acid phosphatase 0.0
Complete
sp_v3.0_unigene18326 SustainPine v3.0 2630
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete
sp_v3.0_unigene18363 SustainPine v3.0 635
• AutoFact: 3-hydroxyacyl-CoA dehyrogenase, putative n=1 Tax=Ricinus communis RepID=B9RKN5_RICCO 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene18388 SustainPine v3.0 562
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 2.158e-13
N-terminus
sp_v3.0_unigene18398 SustainPine v3.0 663
• AutoFact: Ubiquitin [Medicago truncatula] 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Bi-ubiquitin 1.777e-08
Complete
sp_v3.0_unigene18399 SustainPine v3.0 1474
• AutoFact: Voltage-dependent anion channel protein n=1 Tax=Spinacia oleracea RepID=Q41368_SPIOL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Voltage-dependent anion-selective channel protein 9.095e-32
Complete
sp_v3.0_unigene18421 SustainPine v3.0 480
• AutoFact: Beta tubulin (Fragment) n=4 Tax=Tetrapoda RepID=Q60456_CRIGR 1.0e-06
• FL-Next: tr=Beta-tubulin 2; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: Tubulin beta chain 7.745e-12
Complete
sp_v3.0_unigene18426 SustainPine v3.0 1466
• AutoFact: Heat shock protein 70 n=3 Tax=Embryophyta RepID=C9WCK6_9MARC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 1.148e-38
C-terminus
sp_v3.0_unigene18443 SustainPine v3.0 1300
• AutoFact: Beta-expansin 3, putative n=1 Tax=Ricinus communis RepID=B9RW20_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-expansin 4 3.23e-16
Complete
sp_v3.0_unigene18505 SustainPine v3.0 1031
• AutoFact: S-adenosylmethionine synthase 2 (Fragment) n=3 Tax=core eudicotyledons RepID=METK2_PETCR 5.0e-35
• FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
• Sma3: S-adenosylmethionine synthetase 8.296e-34
Misassembled
sp_v3.0_unigene18564 SustainPine v3.0 3216
• AutoFact: Heat shock 70 kDa protein, putative n=1 Tax=Ricinus communis RepID=B9SQC9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative heat-shock protein 1.498e-10
Complete
sp_v3.0_unigene18601 SustainPine v3.0 1077
• AutoFact: Pectinesterase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9STS3_PHYPA 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 2.089e-32
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain