Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cell wall

Term: GO:0005618  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene192866 SustainPine v3.0 612
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IM72_AZOC5 1.4013e-45
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene192884 SustainPine v3.0 276
• Sma3: Beta-expansin 3 2.316e-08
coding
sp_v3.0_unigene192890 SustainPine v3.0 484
• AutoFact: Probable membrane protein YCR013c-yeast (ISS) n=1 Tax=Ostreococcus tauri RepID=Q017S2_OSTTA 7.0e-13
• FL-Next: sp=Phosphoglycerate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoglycerate kinase 0.0
C-terminus
sp_v3.0_unigene192908 SustainPine v3.0 347
• AutoFact: PREDICTED: histone H2A.x-like n=1 Tax=Nomascus leucogenys RepID=UPI00020A9FF3 2.0e-19
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene192937 SustainPine v3.0 419
• AutoFact: Hsp70 [Sterkiella nova] 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene192952 SustainPine v3.0 353
• AutoFact: 40S ribosome protein S8 (Fragment) n=1 Tax=Griffithsia japonica RepID=Q7XYA6_GRIJA 1.0e-16
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 7.731e-18
C-terminus
sp_v3.0_unigene193108 SustainPine v3.0 535
• AutoFact: Putative ribosomal protein S2 n=1 Tax=Barentsia elongata RepID=A8UAC3_9BILA 0.0
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.48e-19
C-terminus
sp_v3.0_unigene193166 SustainPine v3.0 401
• AutoFact: 60S ribosomal protein L4-B (L1) [Arabidopsis thaliana] 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.433e-16
Internal
sp_v3.0_unigene193189 SustainPine v3.0 275
• AutoFact: Ribosomal protein S15a n=3 Tax=Chlamydomonadales RepID=A8JE07_CHLRE 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S8, putative 2.733e-08
N-terminus
sp_v3.0_unigene193204 SustainPine v3.0 337
• AutoFact: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Xenopus laevis] gb|AAC41251.1| 14-3-3 protein epsilon [Xenopus laevis] gb|AAH45025.1| Ywhae-prov protein [Xenopus laevis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 14-3-3 protein 0.0
Internal
sp_v3.0_unigene193228 SustainPine v3.0 297
• AutoFact: 40S ribosomal protein S13 n=1 Tax=Batrachochytrium dendrobatidis JAM81 RepID=F4NSB7_BATDE 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 1.001e-14
N-terminus
sp_v3.0_unigene193238 SustainPine v3.0 318
• AutoFact: Ribosomal protein L3 n=1 Tax=Ectocarpus siliculosus RepID=D7FHR5_ECTSI 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.053e-17
C-terminus
sp_v3.0_unigene193283 SustainPine v3.0 408
• AutoFact: 40S ribosomal protein S2 n=14 Tax=Drosophila RepID=RS2_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.932e-19
Internal
sp_v3.0_unigene193293 SustainPine v3.0 570
• AutoFact: 60S ribosomal protein L4 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N700_PHYIT 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: L1 1.251e-08
Putative C-terminus
sp_v3.0_unigene193373 SustainPine v3.0 514
• AutoFact: Hsp90 protein n=4 Tax=Tetrahymena RepID=Q22W82_TETTH 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene193406 SustainPine v3.0 450
• AutoFact: ribosomal protein S15A [Bombyx mori] gb|AAV34873.1| ribosomal protein S15A [Bombyx mori] gb|ADP21467.1| ribosomal protein S15A [Antheraea yamamai] gb|ADT80666.1| ribosomal protein S15A [Euphydryas aurinia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene193427 SustainPine v3.0 446
• AutoFact: Chain e, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|EE Chain e, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7, putative 4.273e-11
C-terminus
sp_v3.0_unigene193429 SustainPine v3.0 478
• AutoFact: PREDICTED: 60S ribosomal protein L7 n=1 Tax=Apis mellifera RepID=UPI00003C0F40 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7, putative 9.59e-11
Putative C-terminus
sp_v3.0_unigene193459 SustainPine v3.0 369
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Nematostella vectensis RepID=A7S405_NEMVE 7.0e-31
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene193469 SustainPine v3.0 377
• AutoFact: Ribosomal protein S19 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C3T3_9EUKA 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S19 8.467e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain