Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cell wall

Term: GO:0005618  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15484 SustainPine v3.0 477
• AutoFact: Malate dehydrogenase n=1 Tax=Schizophyllum commune H4-8 RepID=D8QLH9_SCHCM 0.0
• FL-Next: sp=Malate dehydrogenase; Sequoia sempervirens (California redwood) (Taxodium sempervirens). 0.0
• Sma3: Malate dehydrogenase 0.0
Internal
sp_v3.0_unigene15637 SustainPine v3.0 1292
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Genomic DNA, chromosome 5, BAC clone:T31K7 7.31e-06
Complete
sp_v3.0_unigene15788 SustainPine v3.0 669
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene15799 SustainPine v3.0 1283
• AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 9.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene15832 SustainPine v3.0 877
• AutoFact: DUF642 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene15854 SustainPine v3.0 2253
• AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana] gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gb|AEE80311.1| glycoside hydrolase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase, putative 1.093e-21
Complete
sp_v3.0_unigene15897 SustainPine v3.0 1876
• AutoFact: Pectin lyase-like protein n=2 Tax=Arabidopsis RepID=Q9CAL5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
Complete
sp_v3.0_unigene15912 SustainPine v3.0 822
• AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9RPA4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glucan endo-1,3-beta-glucosidase 5 2.638e-20
C-terminus
sp_v3.0_unigene15973 SustainPine v3.0 595
• AutoFact: GRP multi-domain protein 1.0e-09
• Sma3: Putative glycine-rich cell wall structural protein 3.005e-07
putative_coding
sp_v3.0_unigene15980 SustainPine v3.0 2185
• AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glucan endo-1,3-beta-glucosidase, putative 4.763e-32
Complete
sp_v3.0_unigene16032 SustainPine v3.0 1311
• AutoFact: Pollen major allergen No.121 isoform 2 n=1 Tax=Cryptomeria japonica RepID=Q588B9_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16034 SustainPine v3.0 643
• AutoFact: Drf_FH1 multi-domain protein 9.0e-18
• Sma3: Glycine-rich protein 9.923e-13
coding
sp_v3.0_unigene16051 SustainPine v3.0 3042
• AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 7.867e-13
Complete
sp_v3.0_unigene16064 SustainPine v3.0 1483
• AutoFact: serine carboxypeptidase-like 45 [Arabidopsis thaliana] ref|NP_973926.1| serine carboxypeptidase-like 45 [Arabidopsis thaliana] sp|Q93Y09.1|SCP45_ARATH RecName: Full=Serine carboxypeptidase-like 45; Flags: Precursor gb|AAL24336.1| serine carboxypeptidase I 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine carboxypeptidase, putative 1.686e-16
C-terminus
sp_v3.0_unigene16129 SustainPine v3.0 1180
• AutoFact: Phi class glutathione transferase n=1 Tax=Cathaya argyrophylla RepID=B8YDC4_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene16130 SustainPine v3.0 4773
• AutoFact: Family 2 glycosyltransferase n=1 Tax=Selaginella moellendorffii RepID=D8QXH9_SELML 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene16224 SustainPine v3.0 843
• AutoFact: 40S ribosomal protein S24 n=1 Tax=Glycine max RepID=C6THP2_SOYBN 5.0e-10
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Putative Complete
sp_v3.0_unigene16324 SustainPine v3.0 1112
• AutoFact: Peroxidase n=1 Tax=Picea abies RepID=Q4W2V5_PICAB 0.0
• FL-Next: tr=Peroxidase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Peroxidase 0.0
C-terminus
sp_v3.0_unigene16618 SustainPine v3.0 1065
• AutoFact: D-alanine--D-alanine ligase family protein [Arabidopsis thaliana] gb|AEE74684.1| D-alanine--D-alanine ligase family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein Sb02g002970; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
C-terminus
sp_v3.0_unigene16749 SustainPine v3.0 1611
• AutoFact: RecName: Full=Expansin-B16; AltName: Full=Beta-expansin-16; AltName: Full=OsEXPB16; AltName: Full=OsaEXPb1.14; Flags: Precursor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-expansin 5.182e-11
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain