Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: translational elongation

Term: GO:0006414  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene18431 SustainPine v3.0 1621
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 8.661e-19
Complete
sp_v3.0_unigene18919 SustainPine v3.0 1400
• AutoFact: 60s acidic ribosomal protein [Prunus dulcis] gb|ABH03379.1| 60S acidic ribosomal protein [Prunus dulcis] 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Misassembled
sp_v3.0_unigene20177 SustainPine v3.0 211
• AutoFact: Unassigned protein
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene20221 SustainPine v3.0 695
• AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20319 SustainPine v3.0 1316
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 7.168e-19
Complete
sp_v3.0_unigene21427 SustainPine v3.0 2420
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Complete
sp_v3.0_unigene23433 SustainPine v3.0 762
• AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cyclotella cryptica RepID=Q5EVA4_9STRA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene23575 SustainPine v3.0 1598
• AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23758 SustainPine v3.0 720
• AutoFact: RecName: Full=Elongation factor 1-gamma; Short=EF-1-gamma; AltName: Full=eEF-1B gamma dbj|BAB64568.1| elongation factor-1 gamma [Carassius auratus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: eEF-1B gamma 1 2.121e-09
Putative N-terminus
sp_v3.0_unigene24758 SustainPine v3.0 1602
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 8.661e-19
Complete
sp_v3.0_unigene25697 SustainPine v3.0 569
• AutoFact: PREDICTED: ribosomal protein P2-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBE8E 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acidic ribosomal protein 5.848e-06
Complete
sp_v3.0_unigene25870 SustainPine v3.0 432
• AutoFact: translation elongation factor 1-alpha [Capsaspora owczarzaki] gb|EFW42675.1| translation elongation factor 1-alpha [Capsaspora owczarzaki ATCC 30864] 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene27435 SustainPine v3.0 491
• AutoFact: Acidic ribosomal protein P2 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J0R4_CHLRE 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acidic ribosomal protein P2 0.0
Complete
sp_v3.0_unigene28458 SustainPine v3.0 2193
• AutoFact: Elongation factor Ts n=1 Tax=Solanum lycopersicum RepID=Q9SWW0_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Ts 1.705e-24
Complete
sp_v3.0_unigene28754 SustainPine v3.0 1038
• AutoFact: Translation elongation factor G, putative n=1 Tax=Ricinus communis RepID=B9RVY0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein synthesis factor, GTP-binding 6.577e-19
Internal
sp_v3.0_unigene29456 SustainPine v3.0 1289
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30737 SustainPine v3.0 727
• AutoFact: Elongation factor 1-beta', putative n=1 Tax=Pediculus humanus corporis RepID=E0VE53_PEDHC 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 1.718e-14
Complete
sp_v3.0_unigene30834 SustainPine v3.0 577
• AutoFact: Ubiquitin-40S ribosomal protein S27a n=60 Tax=Eumetazoa RepID=RS27A_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S27a 2.021e-06
Complete
sp_v3.0_unigene30993 SustainPine v3.0 529
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 3.487e-11
N-terminus
sp_v3.0_unigene31776 SustainPine v3.0 492
• AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=stramenopiles RepID=Q2TTF1_9STRA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain