Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translational elongation

Term: GO:0006414  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene157554 SustainPine v3.0 344
• AutoFact: Elongation factor G n=2 Tax=Pedobacter RepID=C6Y0Q8_PEDHD 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157739 SustainPine v3.0 429
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Euplatypus parallelus RepID=Q967Q5_9CUCU 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.012e-34
Internal
sp_v3.0_unigene157848 SustainPine v3.0 462
• AutoFact: 60S acidic ribosomal protein P0 n=14 Tax=Schizophora RepID=RLA0_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 3.156e-19
Internal
sp_v3.0_unigene157994 SustainPine v3.0 410
• AutoFact: Elongation factor 1b n=1 Tax=Polysphondylium pallidum RepID=D3BEW0_POLPA 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.425e-14
C-terminus
sp_v3.0_unigene158101 SustainPine v3.0 267
• AutoFact: elongation factor 1 alpha long form [Monosiga brevicollis] 8.0e-38
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translation elongation factor-like protein 0.0
Internal
sp_v3.0_unigene158480 SustainPine v3.0 361
• AutoFact: 60S acidic ribosomal protein P0 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NVM9_PHYIT 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 3.156e-19
Internal
sp_v3.0_unigene158901 SustainPine v3.0 531
• AutoFact: Elongation factor 1-beta n=4 Tax=Xenopus RepID=EF1B_XENTR 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.22e-14
Internal
sp_v3.0_unigene158946 SustainPine v3.0 341
• AutoFact: Elongation factor 1 alpha (Fragment) n=183 Tax=Endopterygota RepID=Q5MM87_AEDAE 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.575e-19
Internal
sp_v3.0_unigene159792 SustainPine v3.0 279
• AutoFact: Translation elongation factor n=1 Tax=Citrus maxima RepID=C3VIC2_CITMA 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 1.427e-12
Putative C-terminus
sp_v3.0_unigene162132 SustainPine v3.0 410
• AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene163389 SustainPine v3.0 347
• AutoFact: Translational elongation factor 1 subunit Bbeta n=1 Tax=Pisum sativum RepID=Q6SZ89_PEA 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.473e-14
Putative Complete
sp_v3.0_unigene164617 SustainPine v3.0 271
• AutoFact: 60S acidic ribosomal protein P0-1 [Arabidopsis thaliana] sp|O04204.1|RLA01_ARATH RecName: Full=60S acidic ribosomal protein P0-1 gb|AAB95286.1| 60S acidic ribosomal protein P0 [Arabidopsis thaliana] gb|AAN71918.1| putative 60S acidic ribosomal protein P0 2.0e-09
• FL-Next: sp=60S acidic ribosomal protein P0-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene164915 SustainPine v3.0 276
• AutoFact: Glutathione S-transferase domain-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4QCX4_9MYCE 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT1G09640 protein 6.546e-10
N-terminus
sp_v3.0_unigene165751 SustainPine v3.0 188
• AutoFact: Elongation factor Ts n=1 Tax=Solanum lycopersicum RepID=Q9SWW0_SOLLC 5.0e-14
• FL-Next: sp=Elongation factor Ts, mitochondrial; Zea mays (Maize). 0.0
• Sma3: Elongation factor Ts 1.707e-21
Internal
sp_v3.0_unigene166204 SustainPine v3.0 339
• AutoFact: Elongation factor 1-alpha (Fragment) n=4 Tax=leotiomyceta RepID=Q0PPX7_9LECA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative N-terminus
sp_v3.0_unigene166345 SustainPine v3.0 391
• AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P1 1.304e-10
N-terminus
sp_v3.0_unigene166618 SustainPine v3.0 401
• AutoFact: PREDICTED: similar to eukaryotic translation elongation factor 1 alpha 2 isoform 3 n=1 Tax=Ciona intestinalis RepID=UPI000180BFD5 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene168837 SustainPine v3.0 445
• AutoFact: Ribosomal_60s multi-domain protein 3.0e-17
coding
sp_v3.0_unigene169536 SustainPine v3.0 349
• AutoFact: Ribosomal_60s multi-domain protein 1.0e-20
• Sma3: Acidic ribosomal protein P2 7.797e-06
coding
sp_v3.0_unigene182900 SustainPine v3.0 1064
• AutoFact: Elongation factor 1-gamma 3 n=4 Tax=Andropogoneae RepID=B6T7G7_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 2.541e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain