Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translational elongation

Term: GO:0006414  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene145974 SustainPine v3.0 1351
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Misassembled
sp_v3.0_unigene146019 SustainPine v3.0 217
AutoFact: Ribosomal_60s multi-domain protein 2.0e-15
Sma3: 60S acidic ribosomal protein P1, putative 5.124e-08
coding
sp_v3.0_unigene146029 SustainPine v3.0 917
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene146071 SustainPine v3.0 698
AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Citrus trifoliata RepID=Q8GUS5_PONTR 6.0e-34
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.4013e-45
Internal
sp_v3.0_unigene146081 SustainPine v3.0 834
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Misassembled
sp_v3.0_unigene146097 SustainPine v3.0 320
AutoFact: Elongation factor 1-alpha n=1 Tax=Arabidopsis thaliana RepID=F4HUA0_ARATH 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene146160 SustainPine v3.0 563
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 4.441e-37
N-terminus
sp_v3.0_unigene146194 SustainPine v3.0 737
AutoFact: L3 Ribosomal protein n=1 Tax=Medicago sativa subsp. x varia RepID=Q9SBR8_MEDSV 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L3 4.258e-17
Internal
sp_v3.0_unigene146243 SustainPine v3.0 288
AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 3.0e-30
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 2.509e-29
Misassembled
sp_v3.0_unigene146246 SustainPine v3.0 212
AutoFact: acidic ribosomal protein P1a-like [Solanum tuberosum] 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P1, putative 4.361e-09
N-terminus
sp_v3.0_unigene146301 SustainPine v3.0 634
AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Complete
sp_v3.0_unigene146401 SustainPine v3.0 575
AutoFact: elongation factor 1 alpha [Saccharum hybrid cultivar CP65-357] 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translation elongation factor-like protein 0.0
N-terminus
sp_v3.0_unigene147488 SustainPine v3.0 124
AutoFact: [O] COG5272 Ubiquitin 1.0e-12
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative C-terminus
sp_v3.0_unigene148093 SustainPine v3.0 472
AutoFact: Elongation factor Tu n=3 Tax=Pleosporineae RepID=B2W7S5_PYRTR 8.40779e-45
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 3.641e-21
C-terminus
sp_v3.0_unigene150120 SustainPine v3.0 334
AutoFact: Elongation factor G n=4 Tax=Leptospira RepID=EFG_LEPBJ 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: mEF-G 3.696e-08
Internal
sp_v3.0_unigene150325 SustainPine v3.0 208
AutoFact: 60S acidic ribosomal protein P2 n=1 Tax=Camponotus floridanus RepID=E2AYQ2_9HYME 2.0e-08
FL-Next: sp=60S acidic ribosomal protein P2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Acidic ribosomal protein P2 7.797e-06
Putative N-terminus
sp_v3.0_unigene150416 SustainPine v3.0 279
AutoFact: Acidic ribosomal protein P2 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J0R4_CHLRE 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acidic ribosomal protein 1.103e-08
Putative Complete
sp_v3.0_unigene150510 SustainPine v3.0 197
AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=Eukaryota RepID=Q2TTF2_9EUKA 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene150568 SustainPine v3.0 530
AutoFact: Elongation factor 1-alpha n=21 Tax=Branchiopoda RepID=EF1A_ARTSA 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative N-terminus
sp_v3.0_unigene150597 SustainPine v3.0 144
AutoFact: Ubiquitin family n=1 Tax=Ruminococcus albus 8 RepID=E9S7A1_RUMAL 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polyubiquitin 5.096e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain