Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translational elongation

Term: GO:0006414  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene130564 SustainPine v3.0 464
• AutoFact: Elongation factor EF-G n=4 Tax=Arabidopsis RepID=Q9SI75_ARATH 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene131950 SustainPine v3.0 526
• AutoFact: elongation factor 1-gamma [Glycine max] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 4.351e-12
N-terminus
sp_v3.0_unigene135634 SustainPine v3.0 256
• AutoFact: PREDICTED: ubiquitin A-52 residue ribosomal protein fusion product 1 n=1 Tax=Rattus norvegicus RepID=UPI0001CF4A0F 9.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene140866 SustainPine v3.0 612
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 9.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 1.039e-19
N-terminus
sp_v3.0_unigene141263 SustainPine v3.0 480
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=E9P1K2_MUSAC 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene141314 SustainPine v3.0 395
• AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene141861 SustainPine v3.0 361
• AutoFact: Polyubiquitin (Fragment) n=1 Tax=Lemna minor RepID=Q6B444_LEMMI 2.0e-17
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene142277 SustainPine v3.0 1144
• AutoFact: 60S acidic ribosomal protein P0 n=4 Tax=Papilionoideae RepID=RLA0_SOYBN 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 4.646e-19
Misassembled
sp_v3.0_unigene142301 SustainPine v3.0 1212
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T2M9_RICCO 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene142357 SustainPine v3.0 679
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.133e-14
N-terminus
sp_v3.0_unigene143206 SustainPine v3.0 534
• AutoFact: Elongation factor-1 alpha (Fragment) n=5 Tax=Eukaryota RepID=A9QA20_CATRO 7.0e-29
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.643e-31
Internal
sp_v3.0_unigene143345 SustainPine v3.0 501
• AutoFact: Elongation factor 1-gamma 3 n=4 Tax=Andropogoneae RepID=B6T7G7_MAIZE 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 2.228e-12
C-terminus
sp_v3.0_unigene143371 SustainPine v3.0 306
• AutoFact: RecName: Full=Elongation factor 1-delta; Short=EF-1-delta; AltName: Full=Elongation factor 1B-beta; AltName: Full=eEF-1B beta gb|AAB68395.1| elongation factor 1-beta [Pimpinella brachycarpa] 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 3.493e-15
N-terminus
sp_v3.0_unigene143527 SustainPine v3.0 430
• AutoFact: Elongation factor 1-delta 1 n=4 Tax=Oryza sativa RepID=EF1D1_ORYSJ 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 8.728e-09
N-terminus
sp_v3.0_unigene144155 SustainPine v3.0 703
• AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P1 1.756e-10
Putative Complete
sp_v3.0_unigene144359 SustainPine v3.0 615
• AutoFact: Phospholipase D n=1 Tax=Citrus sinensis RepID=B2L042_CITSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospholipase D 8.355e-30
C-terminus
sp_v3.0_unigene144537 SustainPine v3.0 656
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.306e-15
N-terminus
sp_v3.0_unigene145043 SustainPine v3.0 390
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene145082 SustainPine v3.0 203
• AutoFact: Ribosomal_60s multi-domain protein 3.0e-12
• Sma3: 60S acidic ribosomal protein P1, putative 5.167e-09
coding
sp_v3.0_unigene145928 SustainPine v3.0 671
• AutoFact: Elongation factor 1-alpha n=1 Tax=Arabidopsis thaliana RepID=F4HUA0_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.14644e-42
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain