Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleocytoplasmic transport

Term: GO:0006913  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene164 SustainPine v3.0 4510
• AutoFact: nucleoporin [Lotus japonicus] emb|CAI64811.1| nucleoporin [Lotus japonicus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene5700 SustainPine v3.0 3261
• AutoFact: human Rev interacting-like protein-like [Oryza sativa Japonica Group] dbj|BAD25012.1| human Rev interacting-like protein-like [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HIV-1 rev binding protein, hrbl, putative 2.032e-09
Putative Complete
sp_v3.0_unigene6580 SustainPine v3.0 1821
• AutoFact: C2 domain containing protein 6.0e-10
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene6789 SustainPine v3.0 1850
• AutoFact: C2 domain containing protein 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene14220 SustainPine v3.0 903
• AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene14931 SustainPine v3.0 453
• AutoFact: F10B6.25 n=2 Tax=Arabidopsis thaliana RepID=Q9LQU6_ARATH 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene15147 SustainPine v3.0 1490
• AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene15763 SustainPine v3.0 2641
• AutoFact: human Rev interacting-like protein-like [Oryza sativa Japonica Group] dbj|BAD25012.1| human Rev interacting-like protein-like [Oryza sativa Japonica Group] 1.4013e-45
• FL-Next: Isoform 3 of Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana GN=AGD14 0.0
• Sma3: HIV-1 rev binding protein, hrbl, putative 4.622e-09
Complete
sp_v3.0_unigene17454 SustainPine v3.0 1375
• AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18782 SustainPine v3.0 467
• AutoFact: NSP (nuclear shuttle protein)-interacting GTPase [Arabidopsis thaliana] ref|NP_849540.1| NSP (nuclear shuttle protein)-interacting GTPase [Arabidopsis thaliana] gb|AAL32583.1| putative protein [Arabidopsis thaliana] gb|AAP37738.1| At4g13350 [Arabidopsis t 2.0e-27
• FL-Next: sp=Probable ADP-ribosylation factor GTPase-activating protein AGD14; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene21870 SustainPine v3.0 391
• AutoFact: Ribosomal protein L5 (Fragment) n=1 Tax=Branchiostoma lanceolatum RepID=Q86LY6_BRALA 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene24200 SustainPine v3.0 590
• AutoFact: Ribosomal protein L5 n=1 Tax=Glossina morsitans morsitans RepID=D3TQT3_GLOMM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.365e-14
C-terminus
sp_v3.0_unigene26194 SustainPine v3.0 498
• AutoFact: GTP-binding nuclear protein RAN1, putative n=1 Tax=Ixodes scapularis RepID=B7QIB6_IXOSC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding nuclear protein RAN 4.122e-12
N-terminus
sp_v3.0_unigene26266 SustainPine v3.0 445
• AutoFact: 60S ribosomal protein L5 n=2 Tax=Onchocercidae RepID=E1GB01_LOALO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.818e-14
N-terminus
sp_v3.0_unigene26324 SustainPine v3.0 1013
• AutoFact: ribosomal protein L5b [Ictalurus punctatus] gb|AAK95129.1|AF401557_1 ribosomal protein L5b [Ictalurus punctatus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.932e-14
Complete
sp_v3.0_unigene27319 SustainPine v3.0 635
• AutoFact: RL5, ribosomal protein 5, 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B5YLN7_THAPS 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.708e-14
C-terminus
sp_v3.0_unigene30238 SustainPine v3.0 645
• AutoFact: NSP (nuclear shuttle protein)-interacting GTPase [Arabidopsis thaliana] ref|NP_849540.1| NSP (nuclear shuttle protein)-interacting GTPase [Arabidopsis thaliana] gb|AAL32583.1| putative protein [Arabidopsis thaliana] gb|AAP37738.1| At4g13350 [Arabidopsis t 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene30353 SustainPine v3.0 1083
• AutoFact: GTP-binding protein [Cicer arietinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30790 SustainPine v3.0 623
• AutoFact: 60S ribosomal protein L5 (Fragment) n=1 Tax=Culex tarsalis RepID=B8RJE4_CULTA 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 7.898e-15
C-terminus
sp_v3.0_unigene31212 SustainPine v3.0 661
• AutoFact: human Rev interacting-like protein-like [Oryza sativa Japonica Group] dbj|BAD25012.1| human Rev interacting-like protein-like [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HIV-1 rev binding protein, hrbl, putative 6.985e-09
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain