Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleocytoplasmic transport

Term: GO:0006913  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene154973 SustainPine v3.0 269
AutoFact: 60S ribosomal protein L5 n=2 Tax=Onchocercidae RepID=E1GB01_LOALO 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.604e-14
Internal
sp_v3.0_unigene155525 SustainPine v3.0 414
AutoFact: GTP-binding nuclear protein spi1 n=2 Tax=Oomycetes RepID=D0NZ30_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 7.092e-08
Internal
sp_v3.0_unigene155836 SustainPine v3.0 504
AutoFact: GTP-binding nuclear protein Ran n=1 Tax=Ascaris suum RepID=F1L4Q7_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 7.092e-08
C-terminus
sp_v3.0_unigene156263 SustainPine v3.0 351
AutoFact: 60S ribosomal protein L5, putative n=1 Tax=Ixodes scapularis RepID=B7PFS8_IXOSC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene156482 SustainPine v3.0 560
AutoFact: GTP-binding nuclear protein GSP1/Ran [Meyerozyma guilliermondii ATCC 6260] gb|EDK38181.1| GTP-binding nuclear protein GSP1/Ran [Meyerozyma guilliermondii ATCC 6260] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 6.824e-08
C-terminus
sp_v3.0_unigene156568 SustainPine v3.0 255
AutoFact: PREDICTED: similar to GTP-binding nuclear protein RAN/TC4 n=1 Tax=Hydra magnipapillata RepID=UPI0001924B32 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding nuclear protein RAN 3.9e-12
Internal
sp_v3.0_unigene156835 SustainPine v3.0 262
AutoFact: RecName: Full=60S ribosomal protein L5 gb|AAB84056.1| 60S ribosomal protein [Dunaliella salina] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene157687 SustainPine v3.0 389
AutoFact: GTP-binding nuclear protein Ran n=3 Tax=Tetrahymena RepID=RAN_TETTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 6.433e-08
Internal
sp_v3.0_unigene157700 SustainPine v3.0 373
AutoFact: Ribosomal L18p/L5e family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q231U7_TETTH 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5-1 8.191e-12
Internal
sp_v3.0_unigene157758 SustainPine v3.0 367
AutoFact: GTP-binding nuclear protein Ran n=3 Tax=Caligidae RepID=C1BUI8_9MAXI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding nuclear protein RAN 4.122e-12
Putative N-terminus
sp_v3.0_unigene158104 SustainPine v3.0 251
AutoFact: Putative 60S ribosomal protein RPL5 (Fragment) n=1 Tax=Novocrania anomala RepID=B2YHY0_9BILA 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.604e-14
Internal
sp_v3.0_unigene158209 SustainPine v3.0 376
AutoFact: GTP-binding nuclear protein Ran [Danio rerio] sp|P79735.1|RAN_DANRE RecName: Full=GTP-binding nuclear protein Ran; AltName: Full=GTPase Ran; AltName: Full=Ras-related nuclear protein gb|AAB97093.1| Ran [Danio rerio] gb|AAH58047.1| Ras-related nuclear prot 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 3.851e-08
C-terminus
sp_v3.0_unigene158382 SustainPine v3.0 464
AutoFact: ribosomal protein L5 [Crassostrea gigas] 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.818e-14
N-terminus
sp_v3.0_unigene158476 SustainPine v3.0 286
AutoFact: RecName: Full=60S ribosomal protein L5 gb|AAB84056.1| 60S ribosomal protein [Dunaliella salina] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene159103 SustainPine v3.0 151
AutoFact: Ran family small GTPase n=1 Tax=Naegleria gruberi RepID=D2V0X6_NAEGR 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.807e-08
N-terminus
sp_v3.0_unigene159345 SustainPine v3.0 260
AutoFact: 60S ribosomal protein L5 n=4 Tax=Caenorhabditis RepID=RL5_CAEEL 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.604e-14
N-terminus
sp_v3.0_unigene164988 SustainPine v3.0 177
AutoFact: RAN [Nicotiana sylvestris] gb|AAT40987.1| RAN [Nicotiana sylvestris] 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.848e-08
N-terminus
sp_v3.0_unigene186393 SustainPine v3.0 452
AutoFact: ribosomal protein L5 [Argopecten irradians] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.874e-14
N-terminus
sp_v3.0_unigene190264 SustainPine v3.0 593
AutoFact: 60S ribosomal protein L5 n=1 Tax=Styela clava RepID=RL5_STYCL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 8.672e-15
C-terminus
sp_v3.0_unigene194082 SustainPine v3.0 240
AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Putative Nuclear pore complex protein Nup155 5.361e-06
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain