Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleocytoplasmic transport

Term: GO:0006913  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene102497 SustainPine v3.0 920
• AutoFact: Leucine rich repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RTY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase activating protein 7.531e-18
C-terminus
sp_v3.0_unigene103605 SustainPine v3.0 377
• AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene106895 SustainPine v3.0 338
• AutoFact: Nucleoporin n=1 Tax=Lotus japonicus RepID=Q2UY13_LOTJA 4.0e-35
• FL-Next: tr=Nucleoporin; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Internal
sp_v3.0_unigene107422 SustainPine v3.0 443
• AutoFact: F10B6.25 n=2 Tax=Arabidopsis thaliana RepID=Q9LQU6_ARATH 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene114508 SustainPine v3.0 412
• AutoFact: nucleoporin [Lotus japonicus] emb|CAI64811.1| nucleoporin [Lotus japonicus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene115917 SustainPine v3.0 440
• AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene126657 SustainPine v3.0 1364
• AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127773 SustainPine v3.0 332
• AutoFact: putative small Ras GTP-binding protein [Arabidopsis thaliana] 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 4.19e-08
C-terminus
sp_v3.0_unigene131153 SustainPine v3.0 468
• AutoFact: [J] COG0256 Ribosomal protein L18 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 7.07e-19
Internal
sp_v3.0_unigene132712 SustainPine v3.0 174
• AutoFact: ribosomal protein, putative [Arabidopsis thaliana] 9.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5-1 6.097e-12
Internal
sp_v3.0_unigene138306 SustainPine v3.0 176
• AutoFact: F10B6.25 n=2 Tax=Arabidopsis thaliana RepID=Q9LQU6_ARATH 4.0e-05
• FL-Next: tr=Nuclear pore complex protein Nup155; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene140809 SustainPine v3.0 606
• AutoFact: Ribosomal protein L5, putative n=1 Tax=Ricinus communis RepID=B9SEY9_RICCO 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5-1 8.714e-12
N-terminus
sp_v3.0_unigene147862 SustainPine v3.0 364
• AutoFact: NSP (nuclear shuttle protein)-interacting GTPase [Arabidopsis thaliana] ref|NP_849540.1| NSP (nuclear shuttle protein)-interacting GTPase [Arabidopsis thaliana] gb|AAL32583.1| putative protein [Arabidopsis thaliana] gb|AAP37738.1| At4g13350 [Arabidopsis t 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene151946 SustainPine v3.0 231
• AutoFact: Ras-related nuclear protein [Priapulus caudatus] 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 5.447e-08
Internal
sp_v3.0_unigene152453 SustainPine v3.0 426
• AutoFact: GTP-binding nuclear protein RAN1, putative n=1 Tax=Ixodes scapularis RepID=B7QIB6_IXOSC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 5.807e-08
Putative C-terminus
sp_v3.0_unigene152908 SustainPine v3.0 460
• AutoFact: GTP binding nuclear protein RAN n=1 Tax=Bigelowiella natans RepID=Q5YEU7_BIGNA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 5.807e-08
C-terminus
sp_v3.0_unigene153289 SustainPine v3.0 360
• AutoFact: 60S ribosomal protein L5 n=1 Tax=Dictyostelium discoideum RepID=RL5_DICDI 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 8.356e-15
Internal
sp_v3.0_unigene153442 SustainPine v3.0 427
• AutoFact: 60S ribosomal protein L5 (Fragment) n=1 Tax=Simulium vittatum RepID=B5M0M0_SIMVI 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 7.177e-15
Internal
sp_v3.0_unigene153995 SustainPine v3.0 374
• AutoFact: RecName: Full=60S ribosomal protein L5 gb|AAX48835.1| L5 [Suberites domuncula] 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene154385 SustainPine v3.0 316
• AutoFact: Ran n=2 Tax=Branchiostoma RepID=Q1A7N9_BRABE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 7.092e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain