Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleocytoplasmic transport

Term: GO:0006913  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene31325 SustainPine v3.0 767
AutoFact: Small Ras GTP-binding nuclear protein (Fragment) n=3 Tax=Spermatophyta RepID=F5ANW7_9ROSI 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran-like small GTPase 7.31e-06
Putative Complete
sp_v3.0_unigene31899 SustainPine v3.0 1233
AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene32719 SustainPine v3.0 612
AutoFact: 60S ribosomal protein L5 (Fragment) n=1 Tax=Culex tarsalis RepID=B8RJE4_CULTA 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 9.501e-15
C-terminus
sp_v3.0_unigene35196 SustainPine v3.0 754
AutoFact: Leucine rich repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RTY6_RICCO 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran GTPase activating protein 6.725e-18
N-terminus
sp_v3.0_unigene47638 SustainPine v3.0 157
AutoFact: F10B6.25 n=2 Tax=Arabidopsis thaliana RepID=Q9LQU6_ARATH 8.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene49394 SustainPine v3.0 350
AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 3.0e-36
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene51165 SustainPine v3.0 162
AutoFact: Unassigned protein 7.0e-05
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene52555 SustainPine v3.0 329
AutoFact: a dynamin-like protein ADL3 [Arabidopsis thaliana] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin-2A 3.475e-08
Putative N-terminus
sp_v3.0_unigene61014 SustainPine v3.0 178
AutoFact: Small Ras GTP-binding nuclear protein (Fragment) n=3 Tax=Spermatophyta RepID=F5ANW7_9ROSI 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.447e-08
Internal
sp_v3.0_unigene62069 SustainPine v3.0 217
AutoFact: F10B6.25 n=2 Tax=Arabidopsis thaliana RepID=Q9LQU6_ARATH 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene62389 SustainPine v3.0 308
AutoFact: RAN [Nicotiana sylvestris] gb|AAT40987.1| RAN [Nicotiana sylvestris] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63009 SustainPine v3.0 137
AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene65676 SustainPine v3.0 209
AutoFact: [J] COG0256 Ribosomal protein L18 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.903e-14
Internal
sp_v3.0_unigene68207 SustainPine v3.0 222
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene73714 SustainPine v3.0 497
AutoFact: 60S ribosomal protein L5 n=1 Tax=Postia placenta Mad-698-R RepID=B8P326_POSPM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.656e-14
Putative C-terminus
sp_v3.0_unigene74722 SustainPine v3.0 293
AutoFact: GTP-binding protein n=1 Tax=Chlorella variabilis RepID=E1ZJ35_9CHLO 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.807e-08
Internal
sp_v3.0_unigene75305 SustainPine v3.0 313
AutoFact: [J] COG0256 Ribosomal protein L18 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene75536 SustainPine v3.0 176
AutoFact: GTP-binding nuclear protein Ran-3 n=3 Tax=Oryza sativa RepID=RAN3_ORYSJ 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 4.947e-08
Internal
sp_v3.0_unigene77112 SustainPine v3.0 341
AutoFact: GTP-binding nuclear protein n=2 Tax=Agaricales RepID=D8PSN6_SCHCM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 6.433e-08
Internal
sp_v3.0_unigene97881 SustainPine v3.0 493
AutoFact: NSP (nuclear shuttle protein)-interacting GTPase [Arabidopsis thaliana] ref|NP_849540.1| NSP (nuclear shuttle protein)-interacting GTPase [Arabidopsis thaliana] gb|AAL32583.1| putative protein [Arabidopsis thaliana] gb|AAP37738.1| At4g13350 [Arabidopsis t 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain