Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr18 scaffold_122, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5679 SustainPine v3.0 4240
AutoFact: T-complex protein 11 [Arabidopsis thaliana] gb|AAB72161.1| unknown [Arabidopsis thaliana] gb|AAN41345.1| unknown protein [Arabidopsis thaliana] gb|AEE30311.1| T-complex protein 11 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 3.515e-07
Complete
sp_v3.0_unigene7106 SustainPine v3.0 1664
AutoFact: PREDICTED: similar to oligopeptide transporter, putative n=1 Tax=Vitis vinifera RepID=UPI0001985618 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 7.695e-25
Putative Complete
sp_v3.0_unigene7763 SustainPine v3.0 649
AutoFact: Oligopeptide transporter, putative n=1 Tax=Ricinus communis RepID=B9S740_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 4.733e-26
Internal
sp_v3.0_unigene9846 SustainPine v3.0 1378
AutoFact: pfam00854, PTR2, POT family 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 1.164e-19
C-terminus
sp_v3.0_unigene10505 SustainPine v3.0 747
AutoFact: putative peptide/nitrate transporter [Arabidopsis thaliana] sp|Q9M1I2.1|PTR46_ARATH RecName: Full=Probable peptide/nitrate transporter At3g54450 emb|CAB77565.1| oligopeptide transporter-like protein [Arabidopsis thaliana] gb|AEE79233.1| putative peptide/n 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 2.7e-26
Internal
sp_v3.0_unigene11005 SustainPine v3.0 902
AutoFact: Peptide transporter PTR2-B n=2 Tax=Zea mays RepID=B6SWT0_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 9.246e-29
C-terminus
sp_v3.0_unigene13213 SustainPine v3.0 2139
AutoFact: Eukaryotic release factor 1-2 n=3 Tax=rosids RepID=D2K759_BRAOB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene16471 SustainPine v3.0 629
AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9RGA9_RICCO 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 6.34e-28
C-terminus
sp_v3.0_unigene28438 SustainPine v3.0 630
AutoFact: Similar to peptide transporter [Arabidopsis thaliana] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 2.275e-31
C-terminus
sp_v3.0_unigene28619 SustainPine v3.0 863
AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T755_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 3.247e-30
Putative N-terminus
sp_v3.0_unigene29784 SustainPine v3.0 2735
AutoFact: Eukaryotic release factor 1-2 n=3 Tax=rosids RepID=D2K759_BRAOB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene38962 SustainPine v3.0 987
AutoFact: XRCC4 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 5.783e-06
N-terminus
sp_v3.0_unigene47922 SustainPine v3.0 525
AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T755_RICCO 3.0e-33
FL-Next: tr=Peptide transporter PTR2; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 2.215e-24
Complete
sp_v3.0_unigene48355 SustainPine v3.0 218
AutoFact: Peptide transporter n=1 Tax=Hakea actites RepID=A6YJX5_9MAGN 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 5.643e-33
Internal
sp_v3.0_unigene63781 SustainPine v3.0 324
AutoFact: Peptide transporter n=1 Tax=Hakea actites RepID=A6YJX5_9MAGN 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 1.86e-31
Internal
sp_v3.0_unigene74335 SustainPine v3.0 268
AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9RGA9_RICCO 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 1.433e-06
Internal
sp_v3.0_unigene74799 SustainPine v3.0 386
AutoFact: amino acid/peptide transporter [Prunus dulcis] 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 6.922e-19
Internal
sp_v3.0_unigene76868 SustainPine v3.0 231
AutoFact: peptide transporter like protein [Arabidopsis thaliana] 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 5.935e-13
Internal
sp_v3.0_unigene80939 SustainPine v3.0 180
AutoFact: peptide transporter like protein [Arabidopsis thaliana] 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 9.435e-15
Internal
sp_v3.0_unigene99190 SustainPine v3.0 688
AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9RGA9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 8.783e-15
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain