Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: iron-sulfur cluster assembly

Term: GO:0016226  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1170 SustainPine v3.0 1451
• AutoFact: PREDICTED: similar to NFU4 (NFU domain protein 4) n=1 Tax=Vitis vinifera RepID=UPI00019858D3 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene4037 SustainPine v3.0 1147
• AutoFact: pfam01106, NifU, NifU-like domain 6.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6653 SustainPine v3.0 2384
• AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9SXF3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MLO-like protein 4 1.563e-08
Complete
sp_v3.0_unigene9522 SustainPine v3.0 2071
• AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
• FL-Next: sp=UPF0051 protein ABCI8, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 0.0
Complete
sp_v3.0_unigene9554 SustainPine v3.0 1831
• AutoFact: cysteine desulfurase 1 [Arabidopsis thaliana] sp|O49543.1|NFS1_ARATH RecName: Full=Cysteine desulfurase 1, mitochondrial; AltName: Full=Protein AtMtNifS; Flags: Precursor gb|AAK00758.1|AF229854_1 cysteine desulfurase [Arabidopsis thaliana] emb|CAA16686.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine desulfurase 5.077e-15
Complete
sp_v3.0_unigene10416 SustainPine v3.0 3844
• AutoFact: Putativepod-specific dehydrogenase SAC25 n=5 Tax=Arabidopsis RepID=Q8LCE7_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Short-chain dehydrogenase, putative 3.848e-18
Misassembled
sp_v3.0_unigene12032 SustainPine v3.0 1710
• AutoFact: SufE/NifU family protein [Arabidopsis thaliana] gb|AAK32747.1|AF361579_1 AT4g22220/T10I14_50 [Arabidopsis thaliana] emb|CAA16772.1| nifU-like protein [Arabidopsis thaliana] emb|CAB79177.1| nifU-like protein [Arabidopsis thaliana] gb|AAL87374.1| AT4g22220/ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12091 SustainPine v3.0 426
• AutoFact: Retinol dehydrogenase 12 n=3 Tax=Andropogoneae RepID=B6TAL8_MAIZE 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_91, whole genome shotgun sequence 1.06e-07
C-terminus
sp_v3.0_unigene12889 SustainPine v3.0 1056
• AutoFact: Iron-sulfur assembly protein IscA-like 1 [Arabidopsis thaliana] sp|Q8LBM4.2|ISAM1_ARATH RecName: Full=Iron-sulfur assembly protein IscA-like 1, mitochondrial; Flags: Precursor gb|AAD24604.1| putative HesB-like protein [Arabidopsis thaliana] gb|AAO44055.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HesB/YadR/YfhF family protein, putative, expressed 0.0
Complete
sp_v3.0_unigene16085 SustainPine v3.0 1997
• AutoFact: Protein sufD, putative n=1 Tax=Ricinus communis RepID=B9T968_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16804 SustainPine v3.0 2176
• AutoFact: MLO-like protein 11 [Arabidopsis thaliana] ref|NP_001032070.1| MLO-like protein 11 [Arabidopsis thaliana] sp|Q9FI00.1|MLO11_ARATH RecName: Full=MLO-like protein 11; Short=AtMlo11 gb|AAK53804.1|AF369572_1 membrane protein Mlo11 [Arabidopsis thaliana] dbj|B 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein MLO, putative 2.068e-13
Complete
sp_v3.0_unigene19322 SustainPine v3.0 970
• AutoFact: Iron-sulfur assembly protein IscA, chloroplastic n=3 Tax=Arabidopsis RepID=ISCAP_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Uncharacterized protein ycf83 4.83e-13
Complete
sp_v3.0_unigene20574 SustainPine v3.0 1231
• AutoFact: nifU-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20764 SustainPine v3.0 493
• AutoFact: Iron-sulfur assembly protein IscA [Arabidopsis thaliana] sp|Q9XIK3.2|ISCAP_ARATH RecName: Full=Iron-sulfur assembly protein IscA, chloroplastic; AltName: Full=Plastid SufA-like protein; AltName: Full=Protein scaffold protein AtCpIscA; Flags: Precursor gb| 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Uncharacterized protein ycf83 3.906e-13
Putative Complete
sp_v3.0_unigene21806 SustainPine v3.0 534
• AutoFact: pfam01106, NifU, NifU-like domain 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nitrogen fixation protein nifU, putative 2.452e-08
Putative Complete
sp_v3.0_unigene23888 SustainPine v3.0 1560
• AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAL27501.1|AF439829_1 AT4g24050/T19F6_40 [Arabidopsis thaliana] gb|AAB63619.1| ribitol dehydrogenase isolog [Arabidopsis thaliana] emb|CAB51648.1| putative protein [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Short-chain dehydrogenase, putative 1.881e-18
Complete
sp_v3.0_unigene25047 SustainPine v3.0 1674
• AutoFact: SufE-like protein [Arabidopsis thaliana] sp|Q84W65.2|SUFE_ARATH RecName: Full=SufE-like protein, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1374; Flags: Precursor emb|CAA18220.1| putative protein [Arabidopsis thaliana] emb|CAB79505.1| putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UV-induced protein uvi31, putative 3.168e-09
Complete
sp_v3.0_unigene27072 SustainPine v3.0 1385
• AutoFact: NifU-like protein 2 [Arabidopsis thaliana] sp|Q93W20.1|NIFU2_ARATH RecName: Full=NifU-like protein 2, chloroplastic; Short=AtCNfu2; Short=AtCnfU-V; Flags: Precursor gb|AAK44168.1|AF370353_1 unknown protein [Arabidopsis thaliana] gb|AAL16167.1|AF428399_1 A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene27302 SustainPine v3.0 378
• AutoFact: Iron-sulfur cluster assembly accessory protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22WZ6_TETTH 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Iron-sulfur cluster assembly protein, putative 5.523e-09
Putative Complete
sp_v3.0_unigene27513 SustainPine v3.0 1446
• AutoFact: Iron-sulfur assembly protein IscA-like 2 [Arabidopsis thaliana] sp|Q8LCY2.2|ISAM2_ARATH RecName: Full=Iron-sulfur assembly protein IscA-like 2, mitochondrial; Flags: Precursor dbj|BAB08617.1| unnamed protein product [Arabidopsis thaliana] dbj|BAD94909.1| 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein aq_1857 8.858e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain