Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: spliceosomal complex

Term: GO:0005681  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene186558 SustainPine v3.0 535
AutoFact: PREDICTED: thioredoxin-like 4B isoform 4 [Macaca mulatta] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene188102 SustainPine v3.0 576
AutoFact: splicing factor Prp18-like protein [Arabidopsis thaliana] gb|AAD25794.1|AC006550_2 Similar to gb|U51990 pre-mRNA-splicing factor hPrp18 from Homo sapiens. ESTs gb|T46391 and gb|AA721815 come from this gene [Arabidopsis thaliana] gb|AAK25940.1|AF360230_1 u 1.0e-30
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Prp18 domain containing protein 8.982e-10
N-terminus
sp_v3.0_unigene188658 SustainPine v3.0 632
AutoFact: mitosis protein dim1 [Aedes aegypti] gb|ABF18401.1| U4/U6.U5 snRNP/mitosis protein DIM1 component [Aedes aegypti] gb|EAT42010.1| mitosis protein dim1 [Aedes aegypti] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene190661 SustainPine v3.0 594
AutoFact: PREDICTED: similar to pre-mrna splicing factor prp8 [Tribolium castaneum] gb|EFA13035.1| hypothetical protein TcasGA2_TC010565 [Tribolium castaneum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene202895 SustainPine v3.0 498
AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitosis protein DIM1/U5snRNP-specific component 1.818e-09
Complete
sp_v3.0_unigene210260 SustainPine v3.0 1053
AutoFact: Pre-mRNA-splicing factor SLU7-A [Arabidopsis thaliana] sp|Q9SHY8.2|SLU7A_ARATH RecName: Full=Pre-mRNA-splicing factor SLU7-A gb|AAO22622.1| putative step II splicing factor [Arabidopsis thaliana] gb|AEE34408.1| Pre-mRNA-splicing factor SLU7-A [Arabidopsis 0.0
FL-Next: sp=Pre-mRNA-splicing factor SLU7-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain