Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene23 SustainPine v3.0 1758
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 4.0e-10
FL-Next: tr=Uncharacterized protein; Phytophthora ramorum (Sudden oak death agent). 0.0
Sma3: Extensin 7.927e-30
C-terminus
sp_v3.0_unigene1879 SustainPine v3.0 3620
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TEH2_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin 3.825e-13
Complete
sp_v3.0_unigene2409 SustainPine v3.0 1114
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Sma3: Extensin 3.312e-31
coding
sp_v3.0_unigene2479 SustainPine v3.0 1177
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene2767 SustainPine v3.0 1410
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.866e-33
Complete
sp_v3.0_unigene2801 SustainPine v3.0 524
AutoFact: Extensin_2 multi-domain protein 7.0e-21
Sma3: Extensin 0.0
coding
sp_v3.0_unigene2815 SustainPine v3.0 6319
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Complete
sp_v3.0_unigene3130 SustainPine v3.0 1552
AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Extensin-like protein 5.36e-31
N-terminus
sp_v3.0_unigene3184 SustainPine v3.0 878
AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Shorea parvifolia subsp. parvifolia RepID=C7F8A5_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.08058e-42
C-terminus
sp_v3.0_unigene3226 SustainPine v3.0 524
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene3321 SustainPine v3.0 605
AutoFact: FAP multi-domain protein 5.0e-20
Sma3: Glycine-rich protein 5.632e-13
coding
sp_v3.0_unigene3647 SustainPine v3.0 1332
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 2.604e-33
Complete
sp_v3.0_unigene4185 SustainPine v3.0 784
AutoFact: Pectate lyase n=2 Tax=Carica papaya RepID=Q0Q2I1_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene4264 SustainPine v3.0 499
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 6.576e-39
Internal
sp_v3.0_unigene4337 SustainPine v3.0 1194
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene4480 SustainPine v3.0 484
AutoFact: Expansin-3 n=1 Tax=Petunia x hybrida RepID=Q6RX67_PETHY 3.0e-25
FL-Next: tr=Expansin 1; Cunninghamia lanceolata (China fir). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene4813 SustainPine v3.0 878
AutoFact: Atrophin-1 multi-domain protein 2.0e-16
Sma3: Extensin-like protein 5.958e-12
coding
sp_v3.0_unigene4881 SustainPine v3.0 888
AutoFact: Expansin n=4 Tax=Diospyros kaki RepID=B7U8J4_DIOKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene4993 SustainPine v3.0 941
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 14, putative n=1 Tax=Ricinus communis RepID=B9RKL5_RICCO 0.0
FL-Next: tr=Pollen major allergen No.121 isoform 1; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase 1.334e-34
C-terminus
sp_v3.0_unigene4997 SustainPine v3.0 297
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.803e-23
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain