Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall organization

Term: GO:0009664  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene49677 SustainPine v3.0 972
AutoFact: Pectate lyase n=2 Tax=Carica papaya RepID=Q0Q2I1_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Putative C-terminus
sp_v3.0_unigene49978 SustainPine v3.0 575
AutoFact: Expansin 1 n=1 Tax=Musa acuminata RepID=Q8RVK4_MUSAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene50159 SustainPine v3.0 311
AutoFact: Drf_FH1 multi-domain protein 6.0e-28
Sma3: Glycine-rich protein 2.257e-15
coding
sp_v3.0_unigene51063 SustainPine v3.0 273
AutoFact: alpha-expansin 2 [Populus tremula x Populus tremuloides] 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene51159 SustainPine v3.0 220
AutoFact: Extensin_2 multi-domain protein 9.0e-18
Sma3: Extensin (Class I) 1.32e-20
coding
sp_v3.0_unigene51807 SustainPine v3.0 422
AutoFact: Alpha expansin (Fragment) n=1 Tax=Torenia fournieri RepID=C0SQK7_9LAMI 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene51828 SustainPine v3.0 237
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 8.0e-17
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene52439 SustainPine v3.0 340
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Putative N-terminus
sp_v3.0_unigene53159 SustainPine v3.0 352
AutoFact: Expansin (Fragment) n=1 Tax=Solanum tuberosum RepID=D3YE72_SOLTU 5.0e-38
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
Internal
sp_v3.0_unigene56337 SustainPine v3.0 333
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Putative N-terminus
sp_v3.0_unigene57173 SustainPine v3.0 425
AutoFact: putative pectate lyase 18 [Arabidopsis thaliana] ref|NP_001190827.1| putative pectate lyase 18 [Arabidopsis thaliana] sp|Q9C5M8.2|PEL18_ARATH RecName: Full=Probable pectate lyase 18; AltName: Full=Pectate lyase A10; Flags: Precursor gb|AAW38990.1| At4g247 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Putative C-terminus
sp_v3.0_unigene57550 SustainPine v3.0 390
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.0e-24
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene59402 SustainPine v3.0 250
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 7.015e-36
Internal
sp_v3.0_unigene60920 SustainPine v3.0 245
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Internal
sp_v3.0_unigene61398 SustainPine v3.0 236
AutoFact: Xyloglucan endotransglucosylase/hydrolase n=1 Tax=Sagittaria pygmaea RepID=Q4LET4_9LILI 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 4.53e-39
Internal
sp_v3.0_unigene61945 SustainPine v3.0 297
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
Internal
sp_v3.0_unigene62432 SustainPine v3.0 257
AutoFact: Pectate lyase n=7 Tax=Rosodae RepID=E3VSV6_9ROSA 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene62863 SustainPine v3.0 201
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Internal
sp_v3.0_unigene64069 SustainPine v3.0 205
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Internal
sp_v3.0_unigene64319 SustainPine v3.0 302
AutoFact: pectate lyase precursor [Glycine max] 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain